CI01000047_01373782_01374697


Basic Information

Item Value
gene id CI01000047_01373782_01374697
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 1373782 ~ 1374854 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000047_01373782_01374697.mRNA
ATGTATTTACTGTCAGAAAAGGATACTCACAAGCACTGTCCGGAGTGCCCTCTAAGGCAGCGGGTGGAAGTGAGGTGATGGAGGACACTTTCATCAATCTGTATCGGAGAGCGGCAGGAGGCTGTTAGTGGGAAGTGGGTTAGTGTCAGCCCCCCTAATGAAGCATTTGCTTGCTGCATACCTGGCGCCGGTTAAAAATAGTGGCATTGCAGACGTACCTGTACCAGGCTACCTGCTTGGTGGAACTGAGCAAGGCCGTGACAGGGGGAGGCCATGCGACGTGCTTATGGGGGAAGTACGGTCCACAGCCGACTACATACTACGTGCGACATGTTGCACGTTGGTGTCATTGTGTCATGCGATGGCCAGAACAATGTGTTGGGCACTAAGCAGCGAGTTGGATGTCACATGTCGTTTAAACAGACGGGTGACTATAACAGCATTGTGTGTTCGAACTCTGATCCCCTGGGGAAACCCGGATCTGTTGACAGAGGGAATTCCCCTGGGCATGGTTTTGTCACGCGTAGTAGTAACGACAGATGCGTCACAACATGGATGGGGAGCTCTGTGCAATGGGAGCTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000047_01373782_01374697.mRNA True 583 mRNA 0.52 3 1373782 1374854

Neighbor

gene id symbol gene type direction distance location
CI01000047_01337067_01353593 NA coding downstream 20189 1336969 ~ 1353593 (-)
CI01000047_01175229_01292056 ARID5B coding downstream 81726 1174588 ~ 1292056 (-)
CI01000047_01119401_01120162 ADOA coding downstream 253549 1119152 ~ 1120233 (-)
CI01000047_01071329_01073839 NRBF2B, NRBF2 coding downstream 299943 1070302 ~ 1073839 (-)
CI01000047_00892063_00896561 NA coding downstream 477221 890633 ~ 896561 (-)
CI01000047_01375108_01392690 RHOBTB1.S, RHOBTB2, RHOBTB1 coding upstream 59 1374913 ~ 1392690 (-)
CI01000047_01404421_01451987 NA coding upstream 29517 1404371 ~ 1452053 (-)
CI01000047_01470439_01470729 NA coding upstream 95545 1470399 ~ 1470794 (-)
CI01000047_01654684_01688086 PHYHIPL, PHYHIPLB coding upstream 279284 1654138 ~ 1688308 (-)
CI01000047_01708628_01744282 BICC1B, BICC1 coding upstream 333666 1706068 ~ 1744282 (-)
G200682 NA non-coding downstream 6443 1367124 ~ 1367339 (-)
G200681 NA non-coding downstream 6695 1366740 ~ 1367087 (-)
G200678 NA non-coding downstream 14170 1359390 ~ 1359612 (-)
G200657 NA non-coding downstream 46167 1327394 ~ 1327615 (-)
G200652 NA non-coding downstream 50025 1323497 ~ 1323757 (-)
G200763 NA non-coding upstream 81329 1456183 ~ 1456534 (-)
G200720 NA non-coding upstream 177150 1552004 ~ 1553333 (-)
G200712 NA non-coding upstream 231431 1606285 ~ 1606652 (-)
G200711 NA non-coding upstream 231987 1606841 ~ 1607453 (-)
G200827 NA non-coding upstream 251767 1626621 ~ 1626846 (-)
G200472 NA other downstream 539311 833941 ~ 834471 (-)
CI01000047_00519408_00522108 PYYB other downstream 851540 519108 ~ 522245 (-)
G200299 NA other downstream 1105747 267530 ~ 268035 (-)
G202733 NA other upstream 1757459 3132313 ~ 3133652 (-)
G202944 NA other upstream 2422949 3985342 ~ 3986402 (-)
CI01000047_04213574_04213976 NA other upstream 2838555 4213409 ~ 4214085 (-)
CI01000047_04285605_04286644 COA3A other upstream 2904054 4285227 ~ 4286694 (-)

Expression


Co-expression Network