CI01000047_01813106_01813800


Basic Information

Item Value
gene id CI01000047_01813106_01813800
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 1812857 ~ 1814122 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000047_01813106_01813800.mRNA
ACTGGCTGTGTCTCAAAACGTGAACTGCTAGTGCTTACCCAGTCCAAGACAGCATTTAGGCAAAGAAGGAACGTAAAGCATTTTGGGGCATCATGGGTTGAGTTGACTTAACTAGCTCACAACATTTTGTAACCCACAGACCACCTTCTCTGGCTCATATTGAACAAAGGGCGGCGCTCTACTTTTGCCTGCCTTCACTTTATACTTCTCCGGTCAATGTAACTCACACACAGAGCCCGTGGCCGCGATGACTGGCGCTCACTCTCCGCTGGAATGATCTGATCTGACGGCTGCGGAGAGTCAGCGGTGCTCTGTGAAAGTCATGGCCGCTCAGTGTGAACCCTTAAGCGGATATTTACAGCAATCTGATCCGGGCTCCAACAGCGAGCGCAGCACTGATTCCCCTCTGCCAGTGTCTGAAGATGACTCCAGCGGACCCACGGCACCTCCGGACCCCGAGTGGACCGAGGAGAGGTTTCGAGTGGACCGGAAAAAACTGGAGATCATGTTATTAGCAGTCTTGAATATTGTTTTTGAAAACATGGGTTGAATATATATATATATATTTTCTTCTGATACGCCTTTTGAGTAGTTAGGTCACTTTAGTGTAAAACCCCAATTTTGATGTAGTTACTGAGAGGACTGTATATTCTAATATTCTAACAAGTAGGCCTACATTAACTGTGTGCGCAGTGAACAACTCAATCAATAGGGGGCAGTGTTAAAACATCTTTGCCTTTGTTAAAGTAATTGTAAAGTGACAATGTAGTTAACGGCTTCAAAAAAGTTAAGGATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000047_01813106_01813800.mRNA True 799 mRNA 0.45 2 1812857 1814122

Neighbor

gene id symbol gene type direction distance location
CI01000047_01708628_01744282 BICC1B, BICC1 coding downstream 68575 1706068 ~ 1744282 (-)
CI01000047_01654684_01688086 PHYHIPL, PHYHIPLB coding downstream 124549 1654138 ~ 1688308 (-)
CI01000047_01470439_01470729 NA coding downstream 342063 1470399 ~ 1470794 (-)
CI01000047_01404421_01451987 NA coding downstream 360804 1404371 ~ 1452053 (-)
CI01000047_01375108_01392690 RHOBTB1.S, RHOBTB2, RHOBTB1 coding downstream 420167 1374913 ~ 1392690 (-)
CI01000047_01823330_01823581 NA coding upstream 9150 1823272 ~ 1823581 (-)
CI01000047_01824882_01828103 TFAM coding upstream 10760 1824882 ~ 1828952 (-)
CI01000047_02317565_02318902 DKK1B coding upstream 503077 2317199 ~ 2318963 (-)
CI01000047_02325268_02476792 PRKG1A, PRKG1, PRKG1B coding upstream 511146 2325268 ~ 2476792 (-)
CI01000047_02480919_02482057 NA coding upstream 666329 2480451 ~ 2483286 (-)
G200850 NA non-coding downstream 112616 1699974 ~ 1700241 (-)
G200847 NA non-coding downstream 117406 1695217 ~ 1695451 (-)
G200827 NA non-coding downstream 186011 1626621 ~ 1626846 (-)
G200711 NA non-coding downstream 205404 1606841 ~ 1607453 (-)
G200712 NA non-coding downstream 206205 1606285 ~ 1606652 (-)
G200869 NA non-coding upstream 46460 1860582 ~ 1860871 (-)
G200880 NA non-coding upstream 74635 1888757 ~ 1889106 (-)
G200889 NA non-coding upstream 109538 1923660 ~ 1923995 (-)
G200890 NA non-coding upstream 116815 1930937 ~ 1934351 (-)
G200912 NA non-coding upstream 190469 2004591 ~ 2004815 (-)
G200472 NA other downstream 978386 833941 ~ 834471 (-)
CI01000047_00519408_00522108 PYYB other downstream 1290615 519108 ~ 522245 (-)
G200299 NA other downstream 1544822 267530 ~ 268035 (-)
G202733 NA other upstream 1318191 3132313 ~ 3133652 (-)
G202944 NA other upstream 1983681 3985342 ~ 3986402 (-)
CI01000047_04213574_04213976 NA other upstream 2399287 4213409 ~ 4214085 (-)
CI01000047_04285605_04286644 COA3A other upstream 2464786 4285227 ~ 4286694 (-)
CI01000047_04575184_04576337 GNGT2B, GNGT2 other upstream 2760213 4574335 ~ 4576342 (-)

Expression


Co-expression Network