CI01000047_01823330_01823581


Basic Information

Item Value
gene id CI01000047_01823330_01823581
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 1823272 ~ 1823581 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000047_01823330_01823581.mRNA
ATATACACACAGCTGGCAGAGGATGACAAAGTCCGTTACAAGAACGAAATAAAATCGTGGGAGGAGCACATGATTGAGATCGGAAGGGAAGACCTTGTTCGGAGAAAAGAGAGGAGAGCCATCAAAGCCAAAACCGTCAAAGACAGAAAGAAGAAATCCAAAGTAACAGTGATAAAGGCAAAAGCACCAAAAAAGGCGGCTACTGTTGCTGGAACAGCTGTGAAAAAGACTGTGAAGAGCACCAAGAAGTGAGATTATGTATCTGTGAGACAAAGTGTGTTGTACAAAGGCCAGTTCCGTCCTCAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000047_01823330_01823581.mRNA True 310 mRNA 0.43 1 1823272 1823581

Neighbor

gene id symbol gene type direction distance location
CI01000047_01813106_01813800 NA coding downstream 9150 1812857 ~ 1814122 (-)
CI01000047_01708628_01744282 BICC1B, BICC1 coding downstream 78990 1706068 ~ 1744282 (-)
CI01000047_01654684_01688086 PHYHIPL, PHYHIPLB coding downstream 134964 1654138 ~ 1688308 (-)
CI01000047_01470439_01470729 NA coding downstream 352478 1470399 ~ 1470794 (-)
CI01000047_01404421_01451987 NA coding downstream 371219 1404371 ~ 1452053 (-)
CI01000047_01824882_01828103 TFAM coding upstream 1301 1824882 ~ 1828952 (-)
CI01000047_02317565_02318902 DKK1B coding upstream 493618 2317199 ~ 2318963 (-)
CI01000047_02325268_02476792 PRKG1A, PRKG1, PRKG1B coding upstream 501687 2325268 ~ 2476792 (-)
CI01000047_02480919_02482057 NA coding upstream 656870 2480451 ~ 2483286 (-)
CI01000047_02507950_02519956 ASAH2 coding upstream 684027 2507608 ~ 2520199 (-)
G200850 NA non-coding downstream 123031 1699974 ~ 1700241 (-)
G200847 NA non-coding downstream 127821 1695217 ~ 1695451 (-)
G200827 NA non-coding downstream 196426 1626621 ~ 1626846 (-)
G200711 NA non-coding downstream 215819 1606841 ~ 1607453 (-)
G200712 NA non-coding downstream 216620 1606285 ~ 1606652 (-)
G200869 NA non-coding upstream 37001 1860582 ~ 1860871 (-)
G200880 NA non-coding upstream 65176 1888757 ~ 1889106 (-)
G200889 NA non-coding upstream 100079 1923660 ~ 1923995 (-)
G200890 NA non-coding upstream 107356 1930937 ~ 1934351 (-)
G200912 NA non-coding upstream 181010 2004591 ~ 2004815 (-)
G200472 NA other downstream 988801 833941 ~ 834471 (-)
CI01000047_00519408_00522108 PYYB other downstream 1301030 519108 ~ 522245 (-)
G200299 NA other downstream 1555237 267530 ~ 268035 (-)
G202733 NA other upstream 1308732 3132313 ~ 3133652 (-)
G202944 NA other upstream 1974222 3985342 ~ 3986402 (-)
CI01000047_04213574_04213976 NA other upstream 2389828 4213409 ~ 4214085 (-)
CI01000047_04285605_04286644 COA3A other upstream 2455327 4285227 ~ 4286694 (-)
CI01000047_04575184_04576337 GNGT2B, GNGT2 other upstream 2750754 4574335 ~ 4576342 (-)

Expression


Co-expression Network