CI01000047_02496216_02496407


Basic Information

Item Value
gene id CI01000047_02496216_02496407
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 2496216 ~ 2496521 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000047_02496216_02496407.mRNA
TTTCTGTCCAGCACAATGGCCTTCAGAACAAGTGTATTTAGCCTCAGTCAACATGGGCTGAAAAGCAGCCAGAGATCCAGGCATGATAAGCGCACGTCTAGTTATCTTGTTTATGCAAACGGTAACCAGGTTGTCCAGGAGAGAGCAGTGGATGGACTGCAGACTAATGGAGTCCTTTCCCAACTGTCTTAAAACACTCTCTTTAATGGATTCCTAATGCTCAGCCATCTCTCTTATATCCCTGATGTTTGAGCTACAAGAAAACTGTCCTTTGTGATTTTTGGTCTCATGCACTGTATGGATTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000047_02496216_02496407.mRNA True 306 mRNA 0.44 1 2496216 2496521

Neighbor

gene id symbol gene type direction distance location
CI01000047_02265701_02270952 PCDH15 coding upstream 224551 2265701 ~ 2271665 (+)
CI01000047_02233861_02257560 NA coding upstream 237794 2233593 ~ 2258422 (+)
CI01000047_02105957_02212505 PCDH15B, PCDH15 coding upstream 283702 2105957 ~ 2212514 (+)
CI01000047_01838291_01856228 IPMK coding upstream 639627 1837443 ~ 1856589 (+)
CI01000047_01831728_01834017 UBE2D4, UBE2D4.L, UBE2D1A, UBE2D1B, UBE2D1 coding upstream 662199 1831728 ~ 1834017 (+)
CI01000047_02498979_02505234 A1CF coding downstream 2053 2498574 ~ 2505743 (+)
CI01000047_02562428_02569496 AARSD1 coding downstream 65772 2562293 ~ 2570388 (+)
CI01000047_02581276_02587652 G6PCA.1 coding downstream 84398 2580919 ~ 2589521 (+)
CI01000047_02602977_02614833 MYST2, KAT7B, KAT7 coding downstream 106456 2602977 ~ 2615082 (+)
CI01000047_02738296_02744806 DLX4B coding downstream 241351 2737872 ~ 2745013 (+)
G200011 NA non-coding upstream 14009 2481825 ~ 2482207 (+)
G200066 NA non-coding upstream 66000 2429975 ~ 2430216 (+)
G200065 NA non-coding upstream 66557 2428898 ~ 2429659 (+)
G200063 NA non-coding upstream 69603 2426259 ~ 2426613 (+)
G200062 NA non-coding upstream 70973 2424345 ~ 2425243 (+)
G200090 NA non-coding downstream 83428 2579949 ~ 2580406 (+)
G200130 NA non-coding downstream 88929 2585450 ~ 2586875 (+)
G200132 NA non-coding downstream 98629 2595150 ~ 2595473 (+)
G200133 NA non-coding downstream 99915 2596436 ~ 2598997 (+)
G200136 NA non-coding downstream 120489 2617010 ~ 2617270 (+)
G200003 NA other upstream 177254 2316863 ~ 2318962 (+)
CI01000047_01749606_01752688 NA other upstream 743379 1749606 ~ 1752688 (+)
G199386 NA other upstream 1530760 929871 ~ 965456 (+)
CI01000047_00773429_00831230 EXOC6 other upstream 1663606 773429 ~ 832610 (+)
G199401 NA other upstream 1679132 816480 ~ 817084 (+)
G200076 NA other downstream 24075 2520596 ~ 2577997 (+)
G201186 NA other downstream 522184 3018705 ~ 3088187 (+)
G201387 NA other downstream 1199995 3696516 ~ 3701860 (+)
G201599 NA other downstream 1919292 4415813 ~ 4482457 (+)
G202382 NA other downstream 4319196 6815717 ~ 6816118 (+)

Expression


Co-expression Network