CI01000047_03085017_03085558


Basic Information

Item Value
gene id CI01000047_03085017_03085558
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 3084995 ~ 3085691 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000047_03085017_03085558.mRNA
AGAGTCACGCAATCACCTCTTTCTTTGTACAAGGTTAATAATTTAACTTGTTGCTCGGTACCATTTCTACCCCAAGGCAACCGTGTGTCAAGACGCGTGGTTAAGGTATGCCCAGCAGCTGTTCTCTTCTGTCATGGGTGATATTAGACAGCGCAATGGCTCTGTGAGTAATAATGACACAGATTTATCTGTTGTCCCTTATACAGCGGACGACATCAGAGTGCTTTGTCATAAAGTTGACGATGGGGTCGTTGGGGAAGAAATTGAGATGCAAACTCGTTCAGAAGTGCCAGATGCGGATGCTGACGCAGAGGACTGCCGACGGGTCAACGGCGACGCTTTTTACCGGGTTTGTGTGCCGGTTTGCTGCAAGAGAAACGACACTGTCCGCGATGATGAGGAGGAGGATGATGGTGAGGAGGACACGGGGGCAAAAACAGTTGAAAAAGTATTACAGCTTTATATCGAGATCAGTTACAAGTCCCTTACATTCACCATAGTAACTGTCGTTTCTGCCTGTAACATACCACAGTTACTATAATTACTGATACTACTACAATAAA

Function

NR:

description
hypothetical protein cypCar_00019338

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000047_03085017_03085558.mRNA True 563 mRNA 0.46 2 3084995 3085691

Neighbor

gene id symbol gene type direction distance location
CI01000047_03080182_03082134 SLC35G1 coding downstream 2861 3080086 ~ 3082134 (-)
CI01000047_03002349_03064708 PLCE1 coding downstream 19308 3002349 ~ 3065687 (-)
CI01000047_02939538_02940848 DRD6B coding downstream 142577 2939493 ~ 2942418 (-)
CI01000047_02829408_02858055 ACE coding downstream 226433 2828456 ~ 2858562 (-)
CI01000047_02826142_02826444 NA coding downstream 258551 2825743 ~ 2826444 (-)
CI01000047_03087382_03094014 LGI1B coding upstream 1389 3087080 ~ 3096017 (-)
CI01000047_03115498_03127047 PDE6C coding upstream 29496 3115187 ~ 3128105 (-)
CI01000047_03136341_03145907 CEP55L coding upstream 50221 3135912 ~ 3145907 (-)
CI01000047_03149971_03159412 PRRT2 coding upstream 64269 3149960 ~ 3159412 (-)
CI01000047_03163127_03175326 KIF22 coding upstream 77175 3162866 ~ 3175326 (-)
G202747 NA non-coding downstream 112034 2966977 ~ 2972961 (-)
G202740 NA non-coding downstream 118396 2965854 ~ 2966599 (-)
G202774 NA non-coding downstream 185178 2896064 ~ 2899817 (-)
G202767 NA non-coding downstream 196200 2888578 ~ 2888795 (-)
G202766 NA non-coding downstream 198477 2886206 ~ 2886518 (-)
G202792 NA non-coding upstream 12150 3097841 ~ 3100120 (-)
G202757 NA non-coding upstream 27591 3113282 ~ 3113978 (-)
G202733 NA non-coding upstream 46622 3132313 ~ 3133652 (-)
G202847 NA non-coding upstream 246475 3332166 ~ 3334561 (-)
G202844 NA non-coding upstream 247159 3332850 ~ 3432629 (-)
CI01000047_01708628_01744282 BICC1B, BICC1 other downstream 1369478 1706068 ~ 1744282 (-)
G200472 NA other downstream 2250524 833941 ~ 834471 (-)
CI01000047_00519408_00522108 PYYB other downstream 2562753 519108 ~ 522245 (-)
G200299 NA other downstream 2816960 267530 ~ 268035 (-)
G202944 NA other upstream 712112 3985342 ~ 3986402 (-)
CI01000047_04213574_04213976 NA other upstream 1127718 4213409 ~ 4214085 (-)
CI01000047_04285605_04286644 COA3A other upstream 1193217 4285227 ~ 4286694 (-)
CI01000047_04575184_04576337 GNGT2B, GNGT2 other upstream 1488644 4574335 ~ 4576342 (-)

Expression


Co-expression Network