CI01000047_03163127_03175326 (KIF22)


Basic Information

Item Value
gene id CI01000047_03163127_03175326
gene name KIF22
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 3162866 ~ 3175326 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000047_03163127_03175326.mRNA
ATATGGCACAGCGAGTCTCTGTGAATGATGCTGCTGGATCCAGACGGACTTCCAGAGTTCGTGTAGCGGTTCGGCTGAGGCCCTACATGGACAAGCAGGATGATAAGGGAGAGGGGCCCTGTGTCAGGGGCCTGGGGCCACAAAAGCTGGAGATCATCAACTGGAGGAACGCCACTGAGACCCTTCAATACCAGTTTGACGTGTTTCATGGAGAAGAGACGACGCAGCAGGAGGTTTTTCTGACCTCCGTCAAACCCATCCTCCCCCACATCCTTAATGGTCAGAACGCCAGTGTCTTTGCCTATGGACCCACTGGAGCAGGAAAGACTCACACCATGCTTGGCAGTCAAGAGCAGCCGGGGATCATTCCCAGAGCTGTGAGGGAGGTCTTCAATCTGGTTGGAGCTCAAGAAAAGGGGCAGGATGGTTGGGAATACTCGATTGGGATGTCTTACTTGGAGATCTACAATGAAAAGGTGCTGGACCTGTTGTCCCCAGGTTCCCAGGACCTGCCCATCCGTGAAGACAAGGACAGAAACATCCTCATTCCCGGGCTAACGCACACACCCCTCTCATCCTTTGCCGACTTTGACACTCATTTCATCCCCGCGAGTCTAAACCGCACCACAGCCTCCACTAAACTCAACCAGCGCTCCAGCCGCAGTCACGCTATCCTCCTCATAAAGGTAGTGAAGTCTCAGCGTGGGCCGCCACACAGGCAACAAACAGGAAAGCTGTATTTGGTTGATCTGGCTGGTTCAGAGGACAACCGACGTACAGGAAACCAGGGCATTCGTCTGAAAGAGAGTGGAGCCATCAACCTGTCCCTCTTCACCCTCAGTAAAGTGGTGGACGCTCTGAACGCAGGGGCCGGGGGCCGCGTGCCCTACAGGGACAGTAAACTCACCCGTCTGCTGCAGGACTCTCTAGGTGGTTCCGCCCATTCTGTCATGATCACCAACATCGCACCGGAGTACAGATACTACTTTGACACCTTCTCAGCCCTTAACTTTGCCGCCAAGTCTAAGCAGATTGTCAATCGACCCTTTGTCAGGGAAACAGTTGTGGCCCCTACAATTGTTCCTGGAAAGAGATCCAGAGAGGAACAGGAGGCTGGAGGTTCTGGTGAGCCCCAGAACAAGAGGTCTAAGGAGGGGAAGAAAGCTGAACAGTGCCCATCACTACCCGGACATCCACATGGTTCACCAGATTCATCAGTTCTGGAGAGGCTCCTGGCCCTGGAGAAGATGATGATGGGCTCAGCTGAGAGAGAGAGACTTAACCTGCTCAAAACTGTGGCACAGTCCCGGAAAGAAATTCAGATGTTGAAGGAGAAACAGAAGGAGCTGGAAGACAAAGCAAATATGCTTAACAAACAGAGTGAAGCCACTGAGAAAGAGTCCAAAGATGCACTTCTCTTTAAGTCAGATCTGCCCCCATTGCACAGAAAACAGTCTACAGCTGCCAAACCACGCAAACAGCAGGCCGTTGTCACACCGCTACAGGACACTAGCCGTGGAATGGGGAAAAAGGTGCAGCCGTTGCAGCAGTGTGCTGTGGTGGTTAAACCCTCACAATGCTTGGATAAGAAGAAACGGGTCAAAACTGAGGTGGGTGAGGGTAAGGAAAATGGAGGTGTGGATCCACCCTCTGCTCAAGACGTCAACTGGGAGTCCCATTTGGATTCAGCGTTACTAGAGCAGTCCAGGAAGAAAATCCTGCAGACACTGAACTCTGGCTCTCTGAAGGAGCTCAAGAGCCTGCAGCTGATCGGAGACAAGAAAGCCAAACTAATCATGGGCTGGAGAGAGATTCATGGGGATTTCACAGAGGTGGAAGACCTGAAGAAAATCGAAGGCATTACAGCTAAACGTTTCTCTTCTTTTATAAAGGCGAATATTCTCAGCAGTATGGGAAAGTGAAGCATTTGAGCCATGATGTCTGAAGAGGAGCGTTTTAACACTTGTGCTTTGAGCGTTTGTGTTTTTAATGTTTTTACACCCATTTTATGCGTGTAACGTTGTGTACAGTTTTTTTTTCTAAGTGTACATGCTTGTGTATACTTGACTGCTATTTTCCATGTTTTCTATCATTCCTGCATACTTATGCCAATTTTCCCTTTTAGTATTTAACTTTTTTTCTTTTTTGAAATGAACCTAATTTTTCATATGGCACTAAATAAA

Function

symbol description
kif22 Predicted to enable ATP hydrolysis activity; microtubule binding activity; and microtubule motor activity. Acts upstream of or within several processes, including central nervous system development; somitogenesis; and thigmotaxis. Predicted to be located in cytoplasm; cytoskeleton; and nucleus. Predicted to be part of kinesin complex. Predicted to be active in microtubule. Is expressed in brain. Human ortholog(s) of this gene implicated in spondyloepimetaphyseal dysplasia with joint laxity type 2. Orthologous to human KIF22 (kinesin family member 22).

GO:

id name namespace
GO:0005856 cytoskeleton cellular_component

KEGG:

id description
K10403 KIF22; kinesin family member 22

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000047_03163127_03175326.mRNA True 2183 mRNA 0.49 13 3162866 3175326

Neighbor

gene id symbol gene type direction distance location
CI01000047_03149971_03159412 PRRT2 coding downstream 3454 3149960 ~ 3159412 (-)
CI01000047_03136341_03145907 CEP55L coding downstream 16959 3135912 ~ 3145907 (-)
CI01000047_03115498_03127047 PDE6C coding downstream 34761 3115187 ~ 3128105 (-)
CI01000047_03087382_03094014 LGI1B coding downstream 66849 3087080 ~ 3096017 (-)
CI01000047_03085017_03085558 NA coding downstream 77175 3084995 ~ 3085691 (-)
CI01000047_03177108_03216092 ARHGAP27 coding upstream 1757 3177083 ~ 3216132 (-)
CI01000047_03223945_03241971 NA coding upstream 48297 3223623 ~ 3242716 (-)
CI01000047_03258353_03261127 NA coding upstream 83027 3258353 ~ 3261825 (-)
CI01000047_03271413_03302291 SCN4AA coding upstream 94589 3269915 ~ 3302371 (-)
CI01000047_03321589_03328761 GHRHR2 coding upstream 144366 3319692 ~ 3328761 (-)
G202733 NA non-coding downstream 29214 3132313 ~ 3133652 (-)
G202757 NA non-coding downstream 48888 3113282 ~ 3113978 (-)
G202792 NA non-coding downstream 62746 3097841 ~ 3100120 (-)
G202755 NA non-coding downstream 74166 3077993 ~ 3088700 (-)
G202747 NA non-coding downstream 189905 2966977 ~ 2972961 (-)
G202847 NA non-coding upstream 156840 3332166 ~ 3334561 (-)
G202844 NA non-coding upstream 157524 3332850 ~ 3432629 (-)
G202842 NA non-coding upstream 224523 3399849 ~ 3407492 (-)
G202869 NA non-coding upstream 265501 3440827 ~ 3445116 (-)
G202870 NA non-coding upstream 269889 3445215 ~ 3445658 (-)
CI01000047_01708628_01744282 BICC1B, BICC1 other downstream 1447349 1706068 ~ 1744282 (-)
G200472 NA other downstream 2328395 833941 ~ 834471 (-)
CI01000047_00519408_00522108 PYYB other downstream 2640624 519108 ~ 522245 (-)
G200299 NA other downstream 2894831 267530 ~ 268035 (-)
G202944 NA other upstream 622477 3985342 ~ 3986402 (-)
CI01000047_04213574_04213976 NA other upstream 1038083 4213409 ~ 4214085 (-)
CI01000047_04285605_04286644 COA3A other upstream 1103582 4285227 ~ 4286694 (-)
CI01000047_04575184_04576337 GNGT2B, GNGT2 other upstream 1399009 4574335 ~ 4576342 (-)
G203286 NA other upstream 1699053 4874379 ~ 4876734 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_004491 kif22 coding NC_007123.7 CM002896.2 5048044 ~ 5071836 (+)