CI01000047_03258353_03261127


Basic Information

Item Value
gene id CI01000047_03258353_03261127
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 3258353 ~ 3261825 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000047_03258353_03261127.mRNA
ACACCTGTGAGTTATTGACCACAGCAAAAATATATTGCTGTCTAAAACATTATCTTTTAAAATGACATTTTTGTGAAAAATGGTACTTTCGTCCCTGCTCTCCACTAATTATAACATAAACCTAATTTAAAAGGAAAACAAGATTATGTTTCTTACCTCACTGGCAGATGTTTCTTGTTTTAAGCTTAATTTTCACTTAATTTTGATCATTTTTTCAGTAAACAAGACTTAAGTAATTTTGTAGTATCTTGATTTAAGAATGTTTAGATATTTGTACTGGAAAACAAGACAAAAATGGACAGTAAAAAATTTTTTTTGTGATGTACTGGTCAGGACAGGATCTGTATTTCAACAGTTTTTTTTCTTACAGTGTAGTGATGCATGAACAGCTGACATTTCCATTTGTATTTCATTCAGTCATCTTTGTGCATAAATGGTAAAGTAGCCTTTATCAGTCTTGATGTATTTTGCATCGAGATGATTCACTTGCTCCTTAACATTTTAATGCATGAGTGTATCAATTTGCATGTTTCTCTGAAACGGAATTGTATCATCACAGCTTCACAGCTTCACAACCTGCACCCTTCTGAGAGATGTAGGACTGTACTTCGGTGTAGCTGTCTTATTTCTCTTCTGTCTATGTGATCTGTTCTGACTTCTACATTTTCTTGAAGAGGTGCATTTCAGGACCAAGAATCATGCATTACCTCCTGCTGGGATGTTCAGTGATGGCACTGATTTACCTCTCAGCTGAAGAAAAGAATATCCACGTGTACCAGAAGCCACGATTTTTTGGTGTCAAGACAGGTCGCAGTGTGATAATATACTGTGTGTCGTCTCAACCGTCTTTGCCGGCTAATGTAGAGTGGTTCAAAGACCAGGATTCCAATCTACTCAAGAACCAAAGCCAAAAAATAATTATAAAGGAGAAGACTGAACAAAGAAATGCCTCCCTTACCATAAGGAAAGTGGAGATTGAAGACAGTGGCATTTATTATTGCATACTGAATAAAATTCATGGACCGGGAACTGCTCTAGAAGTGTCCAGATATAGTGATCCCAAAGCTGTCTTGCGGAGATCGAGAGTCAAGGATGTTATTATTTTCCTTCAGGCTTTTCTGTTGATTTTGTGCATTGTTGTTCCTCTGATTCAGTTTTACAGGCTGGGGAAGAAAGAAGAAGCGGATTATGAAGAACCTGAGGATGATCACATATATGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000047_03258353_03261127.mRNA True 1220 mRNA 0.37 4 3258353 3261825

Neighbor

gene id symbol gene type direction distance location
CI01000047_03223945_03241971 NA coding downstream 15637 3223623 ~ 3242716 (-)
CI01000047_03177108_03216092 ARHGAP27 coding downstream 42221 3177083 ~ 3216132 (-)
CI01000047_03163127_03175326 KIF22 coding downstream 83027 3162866 ~ 3175326 (-)
CI01000047_03149971_03159412 PRRT2 coding downstream 98941 3149960 ~ 3159412 (-)
CI01000047_03136341_03145907 CEP55L coding downstream 112446 3135912 ~ 3145907 (-)
CI01000047_03271413_03302291 SCN4AA coding upstream 8090 3269915 ~ 3302371 (-)
CI01000047_03321589_03328761 GHRHR2 coding upstream 57867 3319692 ~ 3328761 (-)
CI01000047_03412414_03435209 KANSL1A coding upstream 150573 3412398 ~ 3436183 (-)
CI01000047_03514753_03523245 NA coding upstream 252626 3514451 ~ 3523245 (-)
CI01000047_03689400_03699969 NA coding upstream 427575 3689400 ~ 3699969 (-)
G202733 NA non-coding downstream 124701 3132313 ~ 3133652 (-)
G202757 NA non-coding downstream 144375 3113282 ~ 3113978 (-)
G202792 NA non-coding downstream 158233 3097841 ~ 3100120 (-)
G202755 NA non-coding downstream 169653 3077993 ~ 3088700 (-)
G202747 NA non-coding downstream 285392 2966977 ~ 2972961 (-)
G202847 NA non-coding upstream 70341 3332166 ~ 3334561 (-)
G202844 NA non-coding upstream 71025 3332850 ~ 3432629 (-)
G202842 NA non-coding upstream 138024 3399849 ~ 3407492 (-)
G202869 NA non-coding upstream 179002 3440827 ~ 3445116 (-)
G202870 NA non-coding upstream 183390 3445215 ~ 3445658 (-)
CI01000047_01708628_01744282 BICC1B, BICC1 other downstream 1542836 1706068 ~ 1744282 (-)
G200472 NA other downstream 2423882 833941 ~ 834471 (-)
CI01000047_00519408_00522108 PYYB other downstream 2736111 519108 ~ 522245 (-)
G200299 NA other downstream 2990318 267530 ~ 268035 (-)
G202944 NA other upstream 535978 3985342 ~ 3986402 (-)
CI01000047_04213574_04213976 NA other upstream 951584 4213409 ~ 4214085 (-)
CI01000047_04285605_04286644 COA3A other upstream 1017083 4285227 ~ 4286694 (-)
CI01000047_04575184_04576337 GNGT2B, GNGT2 other upstream 1312510 4574335 ~ 4576342 (-)
G203286 NA other upstream 1612554 4874379 ~ 4876734 (-)

Expression


Co-expression Network