CI01000047_03321589_03328761 (GHRHR2)


Basic Information

Item Value
gene id CI01000047_03321589_03328761
gene name GHRHR2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 3319692 ~ 3328761 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000047_03321589_03328761.mRNA
ATGGACCTTAATTATGGCTTTATCATCTGGACTCTTATGGTTACATGTGAAGGGGTGAAGACAGTTCATCCTGAATGTTCTATAGTATTGCATCTACAAAAGAAAGAAGCTGAATGTCGGCTCAAAATCGGTTTAACACAGTCTTTGTTAAACTTTAATGCTACAGATACAGGTTGTCTGGTTGAGTGGGATGGTGTGAACTGCTGGCCTGCAGTCAGTGTAGGAGAGAGAGTCTCAGTGTCTTGCCCACCTCCTCTCATGAACTCTCATGAGCTGATCACCCGCACCTGCACTACTGAGGGATGGAGTAGGCTGAGTGTGCCTTATTACAGTGCCTGCTTTCAGGACAACAGCACAGAGCAGGAAGACACTGGACACAGACGAGAGTACTTTACCATGGTGAAGTTGATATACACTGTTGGGTATGGCGTGTCCATTGGCTCTCTCTGTATTGCGGTCTTCATCTTCTGCATTTTTAGAAAGCTTCTGTGTACACGGACCTACATCCACCTCAACCTCTTCTCCACATTCATCCTGAGGGCTTTGGCTGTGTTTGTAAAAGATGCTGTGCTATTCGCCGATGAGACAGTCAATCACTGCACAGTCTCCACTGTTTTGTGCAAGGCTGTGGTGACGTTCTTCCAGTACTGTGTGTTATCAAACTTCTACTGGCTGCTTGTTGAGGGACTTTATCTCCAGACACTGCTAGTGTTCACCTTCGCCCACAAAAGAACATTCTTCTGGTGGTATACTCTTATTGGCTGGGGAACTCCATCTGTCACAGTAATCATCTGGACATTCCTCAAGCATAAATATGACAATCATGGGTGCTGGGATGACCTGGACAGTGGCTACTGGTGGATCATCAAAATTCCCATTTTGCTTTCTGTATTTGTGAACTTTTTAGTGTTTGTTAATATAAGCAGGATGATAGTTGTGAAGACAAAAGCCCCAGAATCAAATGGAGGAGACAGGCAGCTATACAGGCGACTGGCTAAGTCAACTCTTCTGCTCATCCCTCTTTTTGGAGTGCATTACATCGTATTTGCTCTGTTTCCAGAGCATGTGGGTCTAGAGGCGAGACTCTTCTTTGAACTCGTGCTAGGTTCCTTCCAGGGTTTCTTTGTGGCATTGTTATACTGCTTCTTGAACAGTGAGGTCCAGAATGAAATAAGAAAAGAGATTGAGAAATACAAGTCCCGAACTGACAACAACACTTTCCAAATGGCAACGCAAGACTTTACTGCATGAACTTCAGGACATTTTGTAATGACTGCACTTCAGCTTGCTCTGTCATGTTATGTTATACCACTGTCGTGATAATTGCGTAAATGTTTTCACACATCACATATGATTTGTTTTTCAGTCATGTAAAAGTACACACACATATATACATATATATATATATGCATATACATACTATATGGACCAAAGTATTAGGACACCTGACCATTACACCAACAGGGACTGTTATGTCCAAATAAGTGTTATTGTGGGAATTTTTTGCCCATTCATCCAGTAGAGCATTTGTGAGTCAGGCACTGATGTTGGATGAGAATGTCTGGCTCGCAATCTCCATTCCAGTTCATCCCAAAGGTGTTTGATGGGGTTGAGGTCATCACTCTGTGTGGGCCAGTCAAATTCTTACACACCAAACTCATCCAACTATGTCCTGATGGACCTTGGTTTGTGCACCGGGGTACAGTCATGCTGGAATAAAAAAGGGACTTCCCAAAACTTTTCCTACAAATTTGGAAGCATAGCATTGTCTAAAATGTATTGGTATGCTGAAGCATTAAAATTTCCCTTCACTGGAAGAAACCAAACTTTACAGTTGGCACAATGCAGTCAGGCAGGTAACATAATCCTGGCATCCGCCAAACCCAGAATTGCCCATCAGACTGCCAAACAGTCCAGTGGTGGTGTGTTTTACAGTACACCACTCCATCCGACACTTGGGATTGTACTTGTTGATGTGAGACTTGCATGCAGCTGCTCGGCCAAGGAGACCCATTCCACGAAGTTCCCGCCTCACAGGTTTTGTGCTGATATTAATGTCAGTGGAAGTTTGGAACGCATCAGCTATGAATCAGCAGAGCATTGGCTAGTTTTACGCACCATGTGCCTCAACATTCGGTGACCAAACTCTATGACTTTACGTGGTCCTCCAACTTCGTTTCTGCTGTTCCTAAACGCTTCCACTTTTCAGTAATACCACTTGGAATATCTAGCAGGGATGCAATTTGACTTATTGCAAAGGTGGCATCCTATCACAGTACCACGCTTGAATTCTCTTCAGAATGACTCATTTTTTTCACAAATGACTGAAAATGCAGACTGCATGGCTAGGTGCTAGCTTTTACGATGCAATCACACGGGGTGTCAGCGTCAACGCTTGATGGAGGGCATGTCTGAAGCTTGTGTTGATGCGACCGTTATAGTGATAACAGCCAATCACATTACTTTCCGGTGTTGCATGAATGCAATTGGCTAGCGACTGCTCTAGAGTGTTTGCATAAGGCGATCTGATTGGCTGGCGCCTGAAAAGTTGAGAAATCGTCAACTTCTGCTGCTTGCAATGCAACGTGAGTGAAGCGACGCAACGGGACCCACAACTCAGTTCGGCAATGCATGACGTCACCCATTCAAAGTAAACGAGAAGCGCCCCGTGTGAATGCAGCGTTAGGGCACGTTTACACAACAGCAATGTACTAAAAATGCTAAAAATTTTGTGTACAGATGACAACGTTGTCAAAACAATCTCCGTTCAAACAGATCTGTGAAAACAATTTAAAATGCTGTATTATGCATGCCAGGCCAGTAGTTGGCGATGTCACTTTGTAAAGAAAAACGTTTTTGTAGTTTTCATGATGACAATGACAGTATCGCTTTCAAAAACTTGCACTGTGAAACCAGTTTTCAAAAGTTTGCATTTTCAGGCCCCCAAAATGCCGTTGTCGTGTAAACGAATGGCCAGAACGCATGAAAAGTTTTCTGTTTTTATTTGAAAATTATATTGTGTAAATGGCCCCTTATACACCTGTGGCAATGGGTCTGATTGAAACGCTTGAATTCAATAATTAAGAGGGTTGTCCCAATACTTTTGTCCATTTAGTGAATATTTATTGTCTATTTACTATTTATTAAA

Function

symbol description
ghrhr2 Predicted to enable G protein-coupled peptide receptor activity and peptide hormone binding activity. Predicted to be involved in adenylate cyclase-modulating G protein-coupled receptor signaling pathway. Predicted to act upstream of or within G protein-coupled receptor signaling pathway and cell surface receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane.

NR:

description
growth-hormone releasing hormone-like peptide receptor

GO:

id name namespace
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000047_03321589_03328761.mRNA True 3148 mRNA 0.43 13 3319692 3328761

Neighbor

gene id symbol gene type direction distance location
CI01000047_03271413_03302291 SCN4AA coding downstream 17321 3269915 ~ 3302371 (-)
CI01000047_03258353_03261127 NA coding downstream 57867 3258353 ~ 3261825 (-)
CI01000047_03223945_03241971 NA coding downstream 76976 3223623 ~ 3242716 (-)
CI01000047_03177108_03216092 ARHGAP27 coding downstream 103560 3177083 ~ 3216132 (-)
CI01000047_03163127_03175326 KIF22 coding downstream 144366 3162866 ~ 3175326 (-)
CI01000047_03412414_03435209 KANSL1A coding upstream 83637 3412398 ~ 3436183 (-)
CI01000047_03514753_03523245 NA coding upstream 185690 3514451 ~ 3523245 (-)
CI01000047_03689400_03699969 NA coding upstream 360639 3689400 ~ 3699969 (-)
CI01000047_03713156_03716003 NA coding upstream 384395 3713156 ~ 3716003 (-)
CI01000047_03741720_03750331 MAPK7 coding upstream 412309 3741070 ~ 3750375 (-)
G202733 NA non-coding downstream 186040 3132313 ~ 3133652 (-)
G202757 NA non-coding downstream 205714 3113282 ~ 3113978 (-)
G202792 NA non-coding downstream 219572 3097841 ~ 3100120 (-)
G202755 NA non-coding downstream 230992 3077993 ~ 3088700 (-)
G202747 NA non-coding downstream 346731 2966977 ~ 2972961 (-)
G202847 NA non-coding upstream 3405 3332166 ~ 3334561 (-)
G202844 NA non-coding upstream 4089 3332850 ~ 3432629 (-)
G202842 NA non-coding upstream 71088 3399849 ~ 3407492 (-)
G202869 NA non-coding upstream 112066 3440827 ~ 3445116 (-)
G202870 NA non-coding upstream 116454 3445215 ~ 3445658 (-)
CI01000047_01708628_01744282 BICC1B, BICC1 other downstream 1604175 1706068 ~ 1744282 (-)
G200472 NA other downstream 2485221 833941 ~ 834471 (-)
CI01000047_00519408_00522108 PYYB other downstream 2797450 519108 ~ 522245 (-)
G200299 NA other downstream 3051657 267530 ~ 268035 (-)
G202944 NA other upstream 469042 3985342 ~ 3986402 (-)
CI01000047_04213574_04213976 NA other upstream 884648 4213409 ~ 4214085 (-)
CI01000047_04285605_04286644 COA3A other upstream 950147 4285227 ~ 4286694 (-)
CI01000047_04575184_04576337 GNGT2B, GNGT2 other upstream 1245574 4574335 ~ 4576342 (-)
G203286 NA other upstream 1545618 4874379 ~ 4876734 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_004486 ghrhr2 coding NC_007123.7 CM002896.2 4845448 ~ 4854555 (+)
rainbow trout (Oncorhynchus mykiss) G374287 NA non-coding NC_048569.1 CM023223.2 18175629 ~ 18181060 (-)
bowfin (Amia calva) AMCG00016415 NA coding CM030122.1 CM030122.1 19316828 ~ 19322281 (+)