CI01000047_03514753_03523245


Basic Information

Item Value
gene id CI01000047_03514753_03523245
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 3514451 ~ 3523245 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000047_03514753_03523245.mRNA
TTCAGAAAGAATAAAGTGCGGGATTATGTGTCCGACTCGGATTCAGACTACGATGAGTCCTGTAACCCAGACGTCATTTTGAGACAGGCTCTGGCTACAGTTTTGGTCAGGTTCCTCCAGACTGAACCGCAAGGGCGTGTGCTGAAAGTATGTCTGAGATCCTTACGAATCCTCTCAAGAGACAAAAAGGTTATGGGACCTCTGGTCACTGACAGAGCGCTGCTCACTCTAGCCCACCTGGGCGGCATCAGCAATGCACCTATTCCAATAGAAGACACTGACAATGATGTTGACCCCTATAATGACGTCATCGTGGCTATTTCTGAGATCAAATTAGGCCAAGCAGATGAGGATGATCACGGTGGTGAGGAAGACGATGGTTCTGAGGCTGTAACCAGTGATGCGAACGACCCTGTGGTCTGGGGGCCAAGCGATTGGTGTGGTGATCGCAAGGCTAGCACATTTTCAAGCATGAGCCTCGGACCTTCTCGCAGGAGGAGCAGCGTTTTTAAAGCTCTCACACCTGTGCTGGAGAAGTGTTTATCAGTACAGTGGAAGGAACAGTTCAAGGTTGTGCTGGATCCTGCAGCGCCTTTTATAAGTGTGGAAGACTCACAGCAGGCTCAGGAGGCTCTGAAGATCCTTTTTAATATCACACACAGCACACACACTCAAGAACCTGAAGAGGAAGATGCATCTCTCTATCGCCACCTGGCTGCAGTTTTGCGTCACTGTCTGATGGTGTCCTCTGAGGAGGAGGAAGCTACAGATGAATTAAAGGGGCATGCAGCGAACATGCTGTCTGCTCTCCCGTTGAGTTGTCTAGACGTTCTGGTATCCGTGCCTCTGGGTCCAGACTCACACCAGATGAATGGAGTCAACATGGACTGTGTGCACGACCTACTCATGTACATGGAGAGAAAACTGGAGCAGATTCTGCCTCCATTAAAGGATGCTAGCACTAAACCTGAAAAGGGCAACACCTTGAGGAATCGTCTGGTTAGACTGATGACCCACCTGGACACTGAGCTCAAACACTGCGCTGCTGACCTGCTCTTCGTGCTGTGCAAAGAAAATGTGAGTCGTTTCGTCAAGTACACTGGATATGGGAATGCTGCTGGGCTCCTGGCCACTAGAGGCTTGCTGGGAGGTCAAAGGTCACAGGCCTCATCATCAGGAGCACAGTACTCTAGCGATTCAGACTCCGACACCGAGGAGTACCGGCAGATTAAAGACAAAGTGAACCCAGTGACGGGACAGGTGGAAGAGGAGCAGCCTGACCCCATGGAGGGAATGACGGAGGAGGAGAAAGAGGAGGAAGCTCATCGGCTCATCAGTCTTTTTAACAAACTCTCAAAGGATAATATGATTCAGCCAATGGGATTGAACCAAGAGGGTCAGCTGGTGCCAATGTCAGAGCTCAAGGACCTCTCAATGGAGGAGAGGGAATCTGAGGAAGAAAATGATGACCTGGAGAATGTGGAGTAGAATCGACATAGATGTGGTGAACTTTTAAGGTGATGTAGTTACACACTACTACATGTACTTACTATAGTGATAACAGTAAATTATGCATAACTAACCCTTAAAAAAACCCTAACCATAACTCTATAGTAAGTACATGTAGTTAATTAATATTACTTAGTACTTATTTGAGTAATTACAATGTAACTACGTCACCTTAAAATAAAGTGTAAACATGTATTTTGATATTATAATATCTAGTCTTAACAGTTTGACAGCTTATGTCTAAAAACAACCTTAAATAATACCTGAATATGTCTAATTAA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000047_03514753_03523245.mRNA True 1790 mRNA 0.46 8 3514451 3523245

Neighbor

gene id symbol gene type direction distance location
CI01000047_03412414_03435209 KANSL1A coding downstream 78268 3412398 ~ 3436183 (-)
CI01000047_03321589_03328761 GHRHR2 coding downstream 185690 3319692 ~ 3328761 (-)
CI01000047_03271413_03302291 SCN4AA coding downstream 212080 3269915 ~ 3302371 (-)
CI01000047_03258353_03261127 NA coding downstream 252626 3258353 ~ 3261825 (-)
CI01000047_03223945_03241971 NA coding downstream 271735 3223623 ~ 3242716 (-)
CI01000047_03689400_03699969 NA coding upstream 166155 3689400 ~ 3699969 (-)
CI01000047_03713156_03716003 NA coding upstream 189911 3713156 ~ 3716003 (-)
CI01000047_03741720_03750331 MAPK7 coding upstream 217825 3741070 ~ 3750375 (-)
CI01000047_03785018_03800982 NA coding upstream 261497 3784742 ~ 3801004 (-)
CI01000047_03855710_03868781 NA coding upstream 332298 3855543 ~ 3869804 (-)
G202840 NA non-coding downstream 5343 3506921 ~ 3509108 (-)
G202880 NA non-coding downstream 42744 3471487 ~ 3471707 (-)
G202877 NA non-coding downstream 55611 3454530 ~ 3458840 (-)
G202870 NA non-coding downstream 68793 3445215 ~ 3445658 (-)
G202869 NA non-coding downstream 69335 3440827 ~ 3445116 (-)
G202894 NA non-coding upstream 17146 3540391 ~ 3596078 (-)
G202911 NA non-coding upstream 77095 3600340 ~ 3602562 (-)
G202900 NA non-coding upstream 94224 3617469 ~ 3625869 (-)
G202931 NA non-coding upstream 148131 3671376 ~ 3674642 (-)
G202932 NA non-coding upstream 152146 3675391 ~ 3675650 (-)
G202733 NA other downstream 380799 3132313 ~ 3133652 (-)
CI01000047_01708628_01744282 BICC1B, BICC1 other downstream 1798934 1706068 ~ 1744282 (-)
G200472 NA other downstream 2679980 833941 ~ 834471 (-)
CI01000047_00519408_00522108 PYYB other downstream 2992209 519108 ~ 522245 (-)
G200299 NA other downstream 3246416 267530 ~ 268035 (-)
G202944 NA other upstream 274558 3985342 ~ 3986402 (-)
CI01000047_04213574_04213976 NA other upstream 690164 4213409 ~ 4214085 (-)
CI01000047_04285605_04286644 COA3A other upstream 755663 4285227 ~ 4286694 (-)
CI01000047_04575184_04576337 GNGT2B, GNGT2 other upstream 1051090 4574335 ~ 4576342 (-)
G203286 NA other upstream 1351134 4874379 ~ 4876734 (-)

Expression


Co-expression Network