CI01000047_03785018_03800982


Basic Information

Item Value
gene id CI01000047_03785018_03800982
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 3784742 ~ 3801004 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000047_03785018_03800982.mRNA
AGTCACCAATGAGGCTGTCAACATGTCACTTGGACTTTCAATGTCTATTGATCCTCAGTCTTCAAGAGCAGTGGTTTGTGGTCCAACCATACCTAAGAACTGTGATGCAGTAACCACTTACAATGGCATGTGCTTTGAAATCAGTCCAGATAATGTTGTGAGCAGATCTGTGCCAGAGACTCTGAGAGAATGCCCAATATCACAAATTGCTTTTTTACTGGATGGATCTGGAAGTGTAAATTCTTCGGAGTTTAATAAGACGAAGGCTTTTGTTATTGAAATGATCAAAAGTTTTATAGACAATGATACACAGTTTGCCATTGCACAGTTTTCTACAGAATGTGTCATTCATTATAATTTTCAACAAGTCAAAAACGCCACCTGGTGGCAAGATGCAGTGAATCAGATATCTCAACAGGGAGGAATGACCTACACCGCAAGAGCTATAAGAAAACTTGTGAATGAGCTATTTGTAAGTAGTGGAGGTGCAAGACCATCAGCCAGTAAAATTTTCGTTGTTATCACGGATGGTGAATCAACTGATCCAGGTTATTTGACTGCAGCTGTTCAACAAGCACAAGCTAAAAATATAATACGATATGCTATTGGGACAGATATGATAATGACTGCAGTGGGAGCTTTTCAGTGGAAGGGTGGATATCAGCTGTACAAACCAAATAATGATTCAGATTCAGACTTTCAAGCTGGAAGTGAGCATGACAGTTATTTAGGTTATTCCTTGGCAATAGCAACAATGTCAGAAGCAAAGTATGCAGTAATGGGAGCACCAAGACACGAGCATAAGGGACAAGTAACTGTTTCAAGAATTGGTGGAGAGGACCCAAAGCAGCTGGATCCTCCTAAGCCTCAGATTGGCTCATATTTTGGAGCTGAGGTGTGTGTGGTGGATTTGAACCGTGACTCCAATACAGACCTACTTTTGGTATCGGCACCAACATACATGGAGTCTGACCGGGAGGGCATAGTGTTTGTTTACATCTTCACACATCGGGCAAACTTCTTTTTTTCGGATACACTGGTGGGCATGGCAGGTCAGAGGGGTCGGTTTGGCTCTTCTCTGGCCAGTCCAGCAGATCTGAATGGTGATGGTTTCATGGATGTGCTGATTGGAGCTCCTTTAGAGGAGAATGGACAGGGCAGCATCTATATCTTCAATGGGAGAGATGGAGTTATCATTCCAAAATACTCACAGAGGATTGTTGGATCGTCTGTGCGACCAGGTTTGCGGTTCTTTGGGATTTCATTGAGTCAGTCTTCTCTAGACCAGAGTCAAGACAACCTTCCTGACATTGCTGTTGGGTCCAAGGGAGCAGTTCTGCTTCTCAGGTCCAGACCCATCGTGCTCTTGGAAACCAAAGTAACTTACAACCCAACCAAAATACCAACCAGTGAAACAGACCAGTCACTGGAAAACACCATGAAAGTGTGTTTCACCATGCGTCCATACGGACACCGCATAAGAGGTTTATCCAAAATTAGAAATATTCCTTTATACCTATCTGCAAATATTAATTACACCATAACGCTGGATGCCAAGCGAGAGAAATATCGAGCAAACTTCTCACCCAAAAACCGGCTCCTCAGTGATGTGCTGAACATTGGATTGAATGCAGAAACTTGCAGAAGTCATCGTTTCTTTATAGACGCTTTCTCAGAAGATGATCTGAACCCAGTGTCCAATCAGTTGATGTTCACTTTTGAGGGTCTACCAATTGCCACACTGCAAAACATAAAGCCAATACTGCTGCCAGAGATAAAGACCACCACAGACTACAATCTGGATTTTGAGATAAACTGTGGACATGATGATATTTGTGTTGATGACCTCAGGATGGATTTCAATTTCTCTGGGGCTACAAACATAGAGGTTGGAATAATGCAGGAGATCAATGTGACAGTGTTTGTAGAGAACAGAGGAGAAAACTCATACAACACTCTCTTCACCCTCAAATACCCCTTTGGACTTTCCTACAGGAGATTCACATCTAAACAGGGCAGAGTGGAGTGTGTATCTCTGGACAGTGAGCAAAGAGGTTCATTTGGAGAAACCACCTGCCACATCAGTAAACCCATCCTCAAGGGCAACGCTCAGGATGTGTTTTATATTACATACAGCATCGATAAAGAAAGCACCTTTGATCAAAGTGTGGCATTCACCGCTCAGATCAACAGTGGGAATGACCAACACTCTCAAACCAGTCAGTTATTCAGACAGAAATGCATTGGTGTCAAATATGCCATTAACATTGCCTTAATAAGACATGAAGATTCAAGCCTCAATATTAATTTTACTGCGCAGAAAAATGATCTTGATAGACCAGTCAAACAGATCCTAAAGGTTGAAAATGACTTTAGAGAATTAACATTCAAAGTTTTCATCAGAGTACCAGTGATTCTGGGAGATAAATTCATCTGGACTGACAAAAACCTACAGATCCCAGACTGTGTGAAACAGAGGGATGAGCGGCCGTTTGTAACAGATTTTGTGGAAGTAATTAAAAAAGATCATGTGGTGACTGGACTCAGAGCTGCTGTGTTTGAGTTGGTCAGTTCAGCGTCTCTGGAATATGACGAGAGCAAATATATTTTCTTTTCCTCTGATTCTCAATACACTGAACCATCTCTCCAGATTAACACTCAAGTGGAGGTGTATGAGGAGGCGAACCTGACCAATGTGATCACTGGAGGGGTGAGTGGAGGGGTGATAGGAGGACTGCTGCTACTGGCTCTCATCACAGCACCCCTCTATAAGACGACATGCAGTAAAGACTCTGAGGTTAACCATCGCCCGAGTTGTGCCAGTGGGGCCTACACCGGGCTCAGGAAAAGAGTCTTCAAAGACCGAGACCTATCAGCCCAAACAAAACTCCTGGTCTACAGAGCTGTTGTCCTTCCCACCCTGCTGTATGGTGCCGAGTCATGGACCACCTACAGCAGGCACCTGAAAGCCATGGAGCAATACCATCAAAGATCCTTACGAAAGATTCTGAGGATCAGCTGAGAGGAAGCTAACATGACCAGCATCACCACTACAATAATGCAGAACCAACTTCGATGGACTGGCTATGTCATCCAATACACGTCTCTCCAACGCCGATAGCCTAGTGGTTAATGTGGCGACATATGGTGTAAATGCATTCTCGGCGACCCGAGTTCGATTCCCGTCTCGAAGTCCTTTGCTGATTCTGCCCAATGCTTTCCTGTCTGCTCTCTACTGTCCTCTCTGAATAAAGGCATAAAAAGCCCATAAAATATAACTTAAAAAAAAAAGAATAAA

Function

NR:

description
ITGAM

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000047_03785018_03800982.mRNA False 3298 mRNA 0.43 24 3784742 3801004

Neighbor

gene id symbol gene type direction distance location
CI01000047_03741720_03750331 MAPK7 coding downstream 34367 3741070 ~ 3750375 (-)
CI01000047_03713156_03716003 NA coding downstream 68739 3713156 ~ 3716003 (-)
CI01000047_03689400_03699969 NA coding downstream 84773 3689400 ~ 3699969 (-)
CI01000047_03514753_03523245 NA coding downstream 261497 3514451 ~ 3523245 (-)
CI01000047_03412414_03435209 KANSL1A coding downstream 348559 3412398 ~ 3436183 (-)
CI01000047_03855710_03868781 NA coding upstream 54539 3855543 ~ 3869804 (-)
CI01000047_03873674_03934985 NA coding upstream 72455 3873459 ~ 3935129 (-)
CI01000047_03947036_03979744 NA coding upstream 145302 3946306 ~ 3980325 (-)
CI01000047_04022011_04032483 NA coding upstream 220741 4020885 ~ 4032666 (-)
CI01000047_04105620_04111019 NA coding upstream 304419 4105423 ~ 4111184 (-)
G203017 NA non-coding downstream 28343 3756169 ~ 3756399 (-)
G202946 NA non-coding downstream 28959 3754787 ~ 3755783 (-)
G202938 NA non-coding downstream 31911 3752112 ~ 3752831 (-)
G202952 NA non-coding downstream 45002 3729962 ~ 3739740 (-)
G203010 NA non-coding downstream 63386 3720702 ~ 3721356 (-)
G203033 NA non-coding upstream 6350 3807354 ~ 3808077 (-)
G203041 NA non-coding upstream 63512 3864516 ~ 3907080 (-)
G203042 NA non-coding upstream 65159 3866163 ~ 3866531 (-)
G203046 NA non-coding upstream 79874 3880878 ~ 3910785 (-)
G202733 NA other downstream 651090 3132313 ~ 3133652 (-)
CI01000047_01708628_01744282 BICC1B, BICC1 other downstream 2069225 1706068 ~ 1744282 (-)
G200472 NA other downstream 2950271 833941 ~ 834471 (-)
CI01000047_00519408_00522108 PYYB other downstream 3262500 519108 ~ 522245 (-)
G200299 NA other downstream 3516707 267530 ~ 268035 (-)
CI01000047_04213574_04213976 NA other upstream 412405 4213409 ~ 4214085 (-)
CI01000047_04285605_04286644 COA3A other upstream 477904 4285227 ~ 4286694 (-)
CI01000047_04575184_04576337 GNGT2B, GNGT2 other upstream 773331 4574335 ~ 4576342 (-)
G203286 NA other upstream 1073375 4874379 ~ 4876734 (-)
G203840 NA other upstream 2117504 5918508 ~ 5927344 (-)

Expression


Co-expression Network