CI01000047_03823906_03854710


Basic Information

Item Value
gene id CI01000047_03823906_03854710
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 3822146 ~ 3854814 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000047_03823906_03854710.mRNA
CCATAAATATCACAGTGATCTGCAGATGACACACTAGGATGAAACTGGATACACTGTCAGATCGTAACAATTGCAGTATGTTGCATGACTAGGTGCCGCCCCTTTTTACTAATGTTGATATCCTATTGAAATTCTTCTGAAGTAGTTTGCAACCATCAAGAGCAGCACAAAGTTTACTGAGCTCCCCTTATCATCTACATGGCCATTCACATGCATTTTTGCATGTTCTTCACATCTTGAAGAAAATGTGAAGTTCCTTAATTTGTCTTAAGGAACTGTTTTTTTTTTTTCCCAGTACAGATTTCCAAAGTTGTGAGAGATTTATTTATTCTGTCATCAAGTAAACTGTAACAATAGTTTAGAGTTTCCTTTCATTCTTTATGAGAGTGACGTCACAGCTGAACACGGCACACACCGCAGCAGGGCAGTTCTGACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAAAACAGTTGTGGATAATGATACTATTAAAAATCAAGTGTATCAGCTATTATTTTGTCTTATGGACTATAAACATCTTTTATGTAAAATATCCAGGACAGTACTAAATAAAAAAGTAACATGCATTTTTTTTTTTATGATCCCTCTGCTTAAGTTAAAATAGGGGGAGACCGGGGATGGTTGTAACATTTTTGACATTTCTGTCTGTATCTTGGGAGTTCTTTAAAGCTAATGCATTCAAATGTGATTAAAACACAGACACACAATTAACATAACTTAACTTTGATGAGTTTAACTACAAAGCAGTAATTGCCATTACAAAAAGATCACGAGAGATGATGCACTCCTGCAAAAGTTCATTTCAATAACACTGTGAGAGGTTTCAGTTAGTAAATAAGGTCTGCATTAGCTAACATGAATTAACAATGAGCATTTATTAATCTTTCTTAATTTTAAATTAGTTATTAAAATATAAAAGTTCATTGCTTGTTTATGTTAGTTCACAGTACATTAACTAATGTTAACAAATGCAAGCTTTTATTTAAAAAATGTATTAAATGTTGAAATTAACTAAGATTAATAACTTAGAAGTATTGTTTATTGTTAGTTCATGTTGACTAATGCTATTAATGTTAACGAATGAAACCTTTTTGTAAAGTGTTGCTAGTAAGGTTTTAACTTCATCATTCTAATCTTTAATTAATCATGTATTACATCAGTCAAGACCACGTACATTATTTTAGCATAGCACTGACTGTACTTGTTCTGTGTAAACTCTTTTTAAATATATATTTTTTTCAATTAATACCAAGTCATTTTCATCCAGGAATAGATCATTTGCTTATATGTGCTGTAATATTTCCTAAGGTACAGATACACAGAGACCTTCTGTATAGCAAAAGTTTTGCATGCTAATATGTATTCATATAATACAATGGAAAACAGTTGGAGTGTACATTCAAATTCTAGATTTGTTTAGATATCATTAGCAGACAGAGGACAGAAGTGTGTTTGTACACAAAAACATCTGTGAACATACTGCAAGGTATGCAAGGGTTTTTCAGAAATTATTTGACTTCGTTTGGTACATATGAATGATCAGTGTTTGTAACTTTTTCACAATTTATTGCTGTGCATATTTTATATAATAATTAATGTTTGTATATTTCTATATTTATTTCCTCCTCTGCTCCTCTCCAGTTTTAGACCAAACCAACTGAATCTGCTTTCATTACAATGGAGTATCTGAAGTATCTGATGCTGATATTTCTTATCACACAGCACTGTGGGGTTTCCTCACTGAGCACTGGTATTGTGGGAGGTGATGATGCACCTACAGGGAACTGGCCTTGGCATGTCAGTCTACACTTTTTTGACTATTACATCTGTGGAGGATCCCTCATCAGCCACGAATGGGTGCTCACTGCGGCTCATTGCGTTTCCTTCTCGCCCTCAGCCAGTTATTGGACTGTTTATTTGGGCAGACAGAGCCAAAACATTTCAGTCTCTAACCCAAACGAGGTCAGTCGAGGAGTCCAATCCATCATTACACATCCAGAATATGACCCTTCACAGTTGACCAATGACATCGCCTTGCTGAGATTGAGTGAGCCAGTGAACTTTACCAGCTACATCAGCCCAATCTGCCTGGCTGCTAATGACAGTGTCTTTCACAACGGCACCACCTGCTGGTCCACTGGATGGGGAGAAACCGGCTTTGAAGGCGCTGAGCCCAATTCTGGAACTCTGCAGGAACTGCAGATAAATGTGGTGGGCAATAAGGAGTGTGACTGCAGGATTCAAGATGTCCCATTTTGGGACATACCAATCACTCCGACAATGATCTGTGCTGGAGGAGAAACAGGCAAAGGAACATGTTTTGGAGGTTCTGGTGGTCCATTACAGTGTAAGCAGGGTTCTGTATGGATCTTAGCTGGTGTCACTAATTTAGGTATTTCTTGCTTCACTGGAATTACAGCTGACAGTCATGCTAGAGTATCTCAATTCCAAAACTGGATCTTAAAGAATGTTAATGGATCAGACATTGGATTTGTGACTTTTAAATCTGATGGCATCTTCTACCCATTTGGAAATCAAGACATAGAGAGTCCCTCTGAAGATGATGGAAGCTCTCCAATAGTATTCTTGGAAAAACGCTTTGTGTATTTTGGACGTGTTTATCAACAGACTTATGTTAATATCAACGGGCATTTGACATTTGATGGGCCTCTTTCAGAGCCGGTACCCAATTATTTACTGTCGCAAGTCAACAGAGACATCATTGCTCCACTTTGGACAGACATGGACAACACTGTGAATGGAGCCATCTCCTATCATCAGGTCACCAGAGGCGGACTCTTACTAGCAGCCTCAAACCACATAAACCAGTATTTTCCCAATCTGAACTTCACTGCCTCATTGCTATTCATTGCCACCTGGGATAAAGTACCATACTTTAACAACTCACAATCGAGTTCATCTTTTCAAGTTGTTTTGGTCTCTGGTGGCTCTCTGTCGTTTGTCATGATGAACTATGGAAATATCTCCTCTGCTGATCAATGGTTTCAGGCTGGCTATAACACAATAGACTCAACAAATAATTTTTCAATCCCTGTGCCTGATGAAAATACGCTGTCCAACTCCAGCAATGTCAATGTCCCGGGACGCTGGGTATTCCGCGTTGATGGTGGACCTGAAGAGGGAATTTTTTACCCATATGGAGATGAGGATATAAAGAATCCTGCAGAGGATTTTGGAAGTTCTCCACTGATCACCCTGGAGCAGCCATTTGTCTACTTTGGTCTTGTTTATAATCAACTATATGTGAATAACAAGGGGTACTTGACTTTTGAAGGACCTTTTCACCAGTGGTATCCCGATAATTTTCCTGCATACTCGACTAGAGACATCATCGCTCCACTGTGGACAGACATTGACATTACACGCAAAGGAATCATCTCTTACCGACAAGTAACAGATGGTCATCTCTTGAATCGGGCCTCTAGAGACATAAACCAATATTACCCCAACTTGAACTTCTCTGCCTCATGGGCTTTCATTGTAACATGGGATAGAGTACCGTACTATGGATACAGGTGGACAGAGTCGACCTTTCAAGTGGTTTTGGTGTCTGGCAAAAACATGTCATTTATACTCATGCACTTTGGTAATATTGCCCCAGCCATACATCCTGTTATGTCTGGATATGACACAAGTGATTCAACTGATTTCTTTACAATTCCCGTCTCTGACACCACAAACCTGTCATACACAAGCAATGTCAACGTCATGGGTCGATGGATATTTCGAACTGACACTGCATCAGAACACAATGGACTGTTCTATCCATTTAGGAATGGGCACAAACTTCAACAGTATTATGGATTTGGATTTTTTGGATTTCCCATCAGTCTCTATTTGCAGACACCATTTACTTACTTCGGGATCACATACAACTATATTTATGTTTACAAAAATGGATTTCTTACCTTCAAATGGCCATTGTTTCCATCAAGTCCACAAACTCTTCCAGCTTACACAAATAGAAACATTGTTGCTCCACTATGGACAGATATTGACAACAGTGACTTTTACTTCCAAGAATTCAGTGGCGTCCGAGTACTACAACAAGCTACAAATGATATACGTCAATATTTTCCTCAAACAAATTTCACTGCCGACTCAGTTTTTGTTTGTACTTGGGATAATGTGAGATATTATAACACTTCAGCAGAGAATTCCTCTTTTCAAGTACTGCTGATCTCAGGTTCTGGTTTGTCATTTATTGTATTTAATTATGGCAGTATTCCACAAACTGAGCATACTGCAGTGGCTGGATATGACACTGTTGATTCGACCAGCTATTATACAATTCCTGTGTCTAACATCGCTAATCTGACCCACTCCACGAATGTTAATGTTATGGGCCGTTGGGCTTTTCGTGTTGACACTTTGCCAACAAAACTTGGTTTGTTTTATCCAGCTGGCTCTTCGGTCTCTCAGAATCCCTGTCAAAGTAATGCAACCTCACCAGCTGTGAACTTGCAGTATCCTTTCTTGTACTTTGGACGCAAATACCAGAACATATATGTCAACAATAATGGACATTTGACTTTTGATGGACCATTTTATGAAAGACTGCCCAAGGCTTTCCCTGCCAACTCTACTAGAGACATTATAGCTCCACTCTGGGCAATGTTTGACTGTAGTGTCAGTGGAAGAATCTCCTACCGGTTAGTAACTCAGGGCCGTATTCTGGACCAGGCGAGAAATGATGTCCAACAGTATTTCCCTCAGTTTGGGTTCTCAGTACATACAGTCCTCATTGCTACTTGGGATAGAGTGCCCTACTTCAACAGCTCTTTGACGGCTGGATATGACACAATAAACTCAACAAATTATTTTTCAATTCCTGTGCCTGATGAAAATAAACTCTCCAACTCCAGCAATGTCAATGTGACAGGACGATGGGTATTCCGTGTTGATGGCGGGCCTGAGGAGGGAATATTCTACCCATATGGAGGTGTAGAGGATGAGAAAAACCCACAGTCGGATGATGGAAGTTCTCCACTGATCCCCTTGCGGCAGCCATTTGTGTATTTTGGCCATGTATATGACAAAATATTTGTGAATAATAATGGAGACCTGACCTTTGATGAGTCATTTGACCAGTGGTATCCCAGTTATTTTCCTGCATGCTCAACTAGAGACATCATCGCTCCACTGTGGACAGACATTAATAATAGTAGGAAAGGAACCATCTCTTCCCGACAAGTAACAGATGGTCCTCTCTTGAATCGGGCTTCAAGAGACATAAACCAATATTTTCCCAACTTGAACTTCTCTGCCTCGTGGGTTTTTATTGCTACATGGGATAAAGTACCGTATTATGGAAACAGAGAGGCAGAGTCGACCTTCCAGGTGGTTTTGGTGTCTGGAAAAAACCTGTCGTTTACACTCATGCATTATGATTACATTACCCCCACCTATGGTGTAGAGTCCGGCTATGACACAATTTGCTCTACTAATTTCTTTCTGATTCCTGTTTCTGACATCACAAACTTGTCATACACAAGCAATGTCGACGTCATGGGTAGATGGGTATTTCGTGTTGACAATTCATCAGAAAGAAATGGACTTTGTGATGTCACTCAAGCCTCAGATAATCTTCCCAGCGCTCAGGTGTGTGGAAGAACCACATTTACCACCAGCAGCAGCATAGTAGGAGGTCAGAACGCTTCAGCTGGACGCTGGCCATGGCAGGCTAGCATTCTTCTGGACCGCAGTCACTTCTGTGGAGGTTCTCTCATCAACAAAGAGTGGGTGCTGACCGCTGCCCACTGTGTTAATAGTTATTCCATCTATTCTGTGGTTTTGGGGCGTCAGACCCAGCAAGGCGACAACCCCAATGAAGAGTTCAGAGATGTGATGGCAGTTGTCAAACATCCTAGTTACAACAATATTACGAATGACAATGATATCGCTCTGCTCAAATTGAGCTCTCCTGTCACCTTCACTGATTACATCAGCCCCGTGTGTCTAGCAGCTGATGGCAGTGTGTTTAACAACGGCACAGAGAGCTGGATTACTGGATGGGGAAACATTGGCAAAGGAGAGTCCCTCCCATCCCCTAATGTTCTACAGGAAGTGGAGGTTCCTGTAATTGGTAACAGACAGTGCAACTGTCTCTATGGAGTTGGAGAGATAACAGACAACATGATCTGTGCTGGTCTACTGGAGGGAGGCAAGGACTCATGTCAGGGAGATTCAGGAGGTCCGATGGTGAGCAATCAGAGCTCTATATGGGTCCAGTCTGGTATCGTTAGCTTTGGCTGTGCTCGACCTGAATATCCCGGTGTTTACACCAGAGTATCCCACTATCAGGAATGGATCACCTCCTTCATATGCAGCGATCCTCCAGGAAATAGTCAAAAGTACTTATGTCATATGACATCACATATGGACAGTAGGATCAATGCCATTTCAGCTGATTAAGTGTTGTACTGTTAGACTGACTGGGTTGATAAGACTTTTGTTGCATTTTGGCACAAACTTATTATCTTTATCTTCTGTCTGTATCCTTTCATTGGGTGTGAATA

Function

NR:

description
serine protease 27, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000047_03823906_03854710.mRNA True 6622 mRNA 0.41 30 3822146 3854814

Neighbor

gene id symbol gene type direction distance location
CI01000047_03778996_03783444 NA coding upstream 38702 3778996 ~ 3783444 (+)
CI01000047_03771908_03778580 NA coding upstream 43566 3771908 ~ 3778580 (+)
CI01000047_03760606_03768136 NA coding upstream 54010 3760606 ~ 3768136 (+)
CI01000047_03752293_03755079 VKORC1 coding upstream 66987 3750931 ~ 3755159 (+)
CI01000047_03730436_03739299 NA coding upstream 82573 3730243 ~ 3739573 (+)
CI01000047_04012371_04020979 ALDOAA, ALDOA, ALD, ALDOAB coding downstream 157510 4012324 ~ 4021255 (+)
CI01000047_04040223_04054395 NA coding downstream 185306 4040120 ~ 4054395 (+)
CI01000047_04056077_04061495 NA coding downstream 201263 4056077 ~ 4061495 (+)
CI01000047_04065102_04071608 BRAFLDRAFT_264576, BRAFLDRAFT_218264, BRAFLDRAFT_218328, PPP4CB, PPP4C, PPP4CA coding downstream 210288 4065102 ~ 4072324 (+)
CI01000047_04075849_04088601 EIF3CL, EIF3C, EIF3C.L coding downstream 221035 4075849 ~ 4088917 (+)
G201475 NA non-coding upstream 27356 3794286 ~ 3794790 (+)
G201462 NA non-coding upstream 65471 3756466 ~ 3756675 (+)
G201461 NA non-coding upstream 80280 3741053 ~ 3741866 (+)
G201428 NA non-coding upstream 102372 3715514 ~ 3719774 (+)
G201386 NA non-coding upstream 125796 3693528 ~ 3696350 (+)
G201444 NA non-coding downstream 30241 3885055 ~ 3915947 (+)
G201439 NA non-coding downstream 37989 3892803 ~ 3921072 (+)
G201508 NA non-coding downstream 52600 3907414 ~ 3931682 (+)
G201509 NA non-coding downstream 52794 3907608 ~ 3931898 (+)
G201520 NA non-coding downstream 141645 3996459 ~ 3997356 (+)
G201387 NA other upstream 120286 3696516 ~ 3701860 (+)
G201186 NA other upstream 733959 3018705 ~ 3088187 (+)
G200076 NA other upstream 1244149 2520596 ~ 2577997 (+)
G200003 NA other upstream 1503184 2316863 ~ 2318962 (+)
CI01000047_01749606_01752688 NA other upstream 2069309 1749606 ~ 1752688 (+)
G201599 NA other downstream 560999 4415813 ~ 4482457 (+)
G202382 NA other downstream 2960903 6815717 ~ 6816118 (+)

Expression


Co-expression Network