CI01000047_03855710_03868781


Basic Information

Item Value
gene id CI01000047_03855710_03868781
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 3855543 ~ 3869804 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000047_03855710_03868781.mRNA
ATTTTATTGATATAAGTATCACAGTACCAGTTAGCAGCATTATTGGTTTAAACCCTTGTGTATATATATCTGATTATGTTGATGATTTGTTTTGCTTATAGGAGAACTATATTTATTGTGTTTATGTGTGGCTTGTGTAAACATGTGACTATTTGTGGTGAATGCGAATGTGTTATGTTAGACTTGCCTGCATCATGATATGTTCCATAGGCGGGGCCACGACTTTAAGATGGCCACCAGAACATTCAGTAGGCAAGTGTGGTGAGAGTGGCGTGAGCGTGGTCGGAGTACCGCCACTTTTAGTCTGTTTGGTGCAGCAATAGACTGTTGTCACGAACATGTGTTTTGTATTTTTTTTTTTTTTTTTTGGGTTTATTTTTGGTTTGTAGCACTATTTATTTATTTTTTTTCTGCATCATGGGATTTTTTCTACTCTTTTGGTAAAATAAATTTTTGCATCAAACGGATTTCCTGCTGTCCTGGTTACCTCATTACCTCTAACCGCAAGGTTTATCCACAACAGGCATGAAAGTTTCGGTACATCCCTGGTATTTACTTAATTTTGCTATTATTTTACTATTACAACACTGTAGCTACTAGTATGAAAAGTGCTCCACAAACGATTGGCTGCTCACTTTACAAAAGCATTCACACATGAAAGAGACAGTCACAACATTATTTTGGACATTTCATTTTTGCCTGTTTGTATGTCAGAATAGCTGTTTTGATTTCAAGTTATTTTGGGTATATAGCAGTTTTAAACCTCAAACCAAATGTGTTGATTCCACAAAATAGTACTTGTGATATACTGAAAACTAGTTGTCATTTATTTTTGAAACATAGCAATGGTTTTAAAAAGGAGATTGAGGAAAAAGAGGTTCTTTCCCCTGTGGGAGTTCCTCTTCAGTCACATGCGTCAATCTATTTTCGCTTGATTTATTTCTCATTCCCATCAAACACTTTTCACTCAATCAAGTACTGGTCCCTGTTGTTCACTGTTTGTACCACTGTCTGTATGCAGAAATGGACTGGAATTTACGGTTGCTCTTGTGTTTGTTTTGTGTATGTCAGTCAATAATGGCTTTCAACATTGACCCTGTGACCTGGAAGTACTTCACAAACAATGCAAACAGTGGCTTTGGCTATAAAGTGATACAGAAAGGTGAAAGTCTACTTGTGAGTGATCCTTTAATACAACTCAGTCAAACTCAAAGAGGACAAATATATCACTGTACTGTCTCTGAAGGAAACTGCATGCCACTGTCCATTTCCGTCACCAGTGAGGCTGTCAACATGTCACTTGGACTTTCAATGTCTATTGATCCTCAGTCTTCAAGAGCAGTGGTTTGTGGTCCAACCATACCTAAGAACTGTGATGCAGTGACCACTTACAATGGCATGTGCTTTAAAATCAGTCCAGATAATGTTGTGAGCAGATCTGTGCCAAAGACTCTGAGAGTTTGCCATTGCACAGTTTTCTACAGAATGTGTCATTCATTACAAGTTTCAACAAGTCAAAAACGCAATGGCGTGGCAAGATGCAGTGAATCGGATATCTCAACAGAGAGGAGGGACCTACACCGCAACAGCTATAAGAAAACTTGTGTTGGCAATGCTTTTAATAGTTACAGTGCAAGAAGGGAGCTGGAAAGGATTGCATCTTTACCCTCCAATAATCATGTGTTCAAAGTAAATGATTTCGACGCGCTGGAAAGCATTCGTGAAAAACTCAAAGAGAACATTATTGCCATTGAAGATATGATAATGACTGCAGTGGGAGCTTTCCAGTGGAAGGGTGGATATCAATTGTACAAACCAAATGATAAGTCAGATGACTTTCAAGCTGGAAGTGAGCATGACAGTTATTTAGGTTATTCTTTGGCAATAGCAACAATGTACAGAGGAAAGTATGCAGTCATGGGAGCGCCAAGACACAAACATAAGGGACAAGTAACTGTTTCAAAAATTGATGGAAAGGACTTAAAGCAGCTGGATCCTCCTAAGCCTCAGATTGGCTCATATTTTGGAGCTGAGTCAGACTTCATTTTTTCGGATACACTGGTGGGCATGGCAGGTCAGAGGGGTCGGTTTGGCTCTTCTCTGGCCAGTCCAGCAGATCTGAATGGTGATGGTTTCATGGATGTGCTGATTGGAGCTCCTTTAGAGGAGGATGGACAGGGCAGCATCTACATCTTCAATGGGAGAGATGGAGTTATCATTCCAAAATATTCACAGAGGATTGTTGGATCATCTGTGCGACCAGGTTTGCGGTTCTTTGGGATTTCATTGAGTCAGTCTTCTCTAGACCAGAGTCAAGACAACCTTCCTGACATTGCTGTTGGGTCCAAGGGAGCAGTTCTGCTTCTCAGGTCCAGACCCATCATGCGCTTGGAAACCAAAGTAACTTACAACCCAACCAAGATACCAACCAGTGAAACAGACCAGTCACTGGAAAACACCATGAAAGTGTGTTTCACCATGCGTCCATACGGACACCGCATAAGAGGTTTATCCAAAATTAGAAATATTCCTTTATACCTATCTGCAAATATTAATTACACCATAATGCTGGATGCCAAGCGACAGAAATATCGAGCAAACTTCTCACCCAAAAACCGGCTCCTCAGTGATGTGCTGAACATTGGATTGAATGCAGAAACTTGCAGAAGTCATCGTTTCTTTATAGACGCTTTCTCAGAAGATGCTCTAAACCCAGTGTCCAATCAGTTAACATTCACATTTGAGGGTCTACCATCTAGAACAATGCAAAACATAAAGCCAGTACTGCTGCCAGAGATAAAGACCACCACAGACCACAATCTGGATTTTGAGATAAACTGTGGACATGATGATATTTGTGTTGATGACCTCAGGATGGATTTCAATTTCTCTGGGGCTACAAACATAGAGGTTGGAATAATGCAGGAGATCAATGTGACAGTGTTTGTAGAGAACAGAGGAGAAAACTCATACAACACTCTCTTCACCCTCAAATACCCCTTTGGACTTTCCTACAGGAGAATCACATCTAAACAGGGCAGAGTGGAGTGTGAATCTCTGGACAGTGAGCAAAGAGGTTCATTTGGAGAAACCACCTGCCACATCAGTAAACCCATCCTCAAGGGCAACGCTCAGGCTGTGTTTCTTATTACGTACAGCATCGATAAAGAAAGCACCTTTGATCAAAATGTGAATTTCACCGCTCAGATCAACAGTGGGAATGACCAACACTCTCAAACCAGTGAATTATTCAGGTGGAAGAGCATTGGTGTCAAATATGCCATTAACATTGCCTTAATAAGACATGAAGATTCAAGCCTGCACATTAATTTTACTGCACAGAAAAATGATCTTGACAGACCAGTCAAACAGATCCTAAAGGTTGAAAATGACTTTAGAGAATTAACTTTCAAAGTTTTCATCAGAGTACCAGTGATTCTGGGAGATAAATTCATCTGGACTGACAAAAACATACAGATTCCAGACTGTGTGAAACAGAGGGATGAGCGGCCGATTGTAACCGATTTTGTGGAAGTAATCAAAAAGGATCGAATGGTGACTGGACTCAGAGCTGCTGTGTTTGAGCTGGTCAGTTCAACATCTCTGGAATATGACGAGAGCAAATATATTTTCTTTTCCTCTGATTCTCAACACACTGCACCATCTCTCCAGATTAACACTCAAGTGGAGGTGTATGAGGAGGCGAACCTGACCAAAGTGATCATTGGAGGGGTGATTGGAGGACTGCTGCTACTGGCTGTCATCACAGCGGCCCTCTATAAGGCTGGATTCTTTAAAAGCCAATACAAGCAGTTGCTAGAAAATGCAGAACAAAGTGCTGAAGATGAGCCAATCACTGAAAAATTAGGTTAACAATAATAACCAACCACAATAGCGGTATATTAAAGAATCAAATATGGCTTTACATGCAAATGTGTAGAATATAGTATGTGTATGTATGCAAATATTATTGATATACTGCTTGTACGATCATCATAAGCTTTTCATTATCAAATTCTGTAATGTGTTTATCAAATAAA

Function

NR:

description
ITGAM

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000047_03855710_03868781.mRNA True 4040 mRNA 0.40 26 3855543 3869804

Neighbor

gene id symbol gene type direction distance location
CI01000047_03785018_03800982 NA coding downstream 54539 3784742 ~ 3801004 (-)
CI01000047_03741720_03750331 MAPK7 coding downstream 105168 3741070 ~ 3750375 (-)
CI01000047_03713156_03716003 NA coding downstream 139540 3713156 ~ 3716003 (-)
CI01000047_03689400_03699969 NA coding downstream 155574 3689400 ~ 3699969 (-)
CI01000047_03514753_03523245 NA coding downstream 332298 3514451 ~ 3523245 (-)
CI01000047_03873674_03934985 NA coding upstream 3655 3873459 ~ 3935129 (-)
CI01000047_03947036_03979744 NA coding upstream 76502 3946306 ~ 3980325 (-)
CI01000047_04022011_04032483 NA coding upstream 151941 4020885 ~ 4032666 (-)
CI01000047_04105620_04111019 NA coding upstream 235619 4105423 ~ 4111184 (-)
CI01000047_04128025_04134725 NIF3L1 coding upstream 258098 4127902 ~ 4134725 (-)
G203025 NA non-coding downstream 11489 3777329 ~ 3844054 (-)
G203022 NA non-coding downstream 17315 3774503 ~ 3838228 (-)
G203021 NA non-coding downstream 25091 3766627 ~ 3830452 (-)
G203033 NA non-coding downstream 47466 3807354 ~ 3808077 (-)
G203017 NA non-coding downstream 99144 3756169 ~ 3756399 (-)
G203046 NA non-coding upstream 11074 3880878 ~ 3910785 (-)
G203051 NA non-coding upstream 35818 3905622 ~ 3906224 (-)
G203059 NA non-coding upstream 79812 3949616 ~ 3955274 (-)
G203067 NA non-coding upstream 134829 4004633 ~ 4075704 (-)
G202733 NA other downstream 721891 3132313 ~ 3133652 (-)
CI01000047_01708628_01744282 BICC1B, BICC1 other downstream 2140026 1706068 ~ 1744282 (-)
G200472 NA other downstream 3021072 833941 ~ 834471 (-)
CI01000047_00519408_00522108 PYYB other downstream 3333301 519108 ~ 522245 (-)
G200299 NA other downstream 3587508 267530 ~ 268035 (-)
CI01000047_04213574_04213976 NA other upstream 343605 4213409 ~ 4214085 (-)
CI01000047_04285605_04286644 COA3A other upstream 409104 4285227 ~ 4286694 (-)
CI01000047_04575184_04576337 GNGT2B, GNGT2 other upstream 704531 4574335 ~ 4576342 (-)
G203286 NA other upstream 1004575 4874379 ~ 4876734 (-)
G203840 NA other upstream 2048704 5918508 ~ 5927344 (-)

Expression


Co-expression Network