CI01000047_04022011_04032483



Basic Information


Item Value
gene id CI01000047_04022011_04032483
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 4020885 ~ 4032666 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000047_04022011_04032483.mRNA
AGCTATTATGAGCTTCACCGTCATTGTGCATACTTTCATTTACAGGAAAGAATGAAACGAGTCAAACCTGTTTTTTTATGAAAAGTTTGTCTATCTTTATTGCCAGAAAGACATGTCAAACAGGGGATCTAAAGAGAATGAAAGAGGTAAGACACCATTCTTTCACAACATTTCATTTCAGCCATGGAGTTGTCAGTGATCTTGCTCAGCTTCTTAGCCATGATGAGTATGGAGGGCTCAAATGCACAGACATATGATTGTGGTGTAGCTCCTCTAAATACACGTATAGTTGGCGGCACAGATGCCCCTGCAGGTAAATGGCCCTGGCAGTACAACGACACCCTTCTCAATAATGACATCTCCCTGATGAAACTGAGTCAACCTGTGACCTTCACTCAATACATTCGTCCAGTCTGCCTGGCATCCAAAGAGAGTGTCTTTCACAACGCCACAACCTGCTGGGCTACAGGTTGGGGAAATATTGGCAAAAACCAGGCGTTGCCGGTTCCTCAGACACTTCAGGAGGTGGAAATCCCAGTTGTGGGCAGCTCAGAATGTAGCTGCCAGTATAAGCCAGTAGGTGGTATTAAAATCACACCACAGATGATTTGTGCTGGGAGAACAGGCAAAGGAACCTGTCAGGGAGATTCTGGAGGTCCATTACAGTGCAAACAGGGTTCTGTGTGGGTCCAGGCTGGGATCACAAGTTTTGGGACGGACCTGGGCTGTGCCATAGAAGGGTTCCCAGAGGTGTTTTCACGTGTCTCTGAGTTCAACACTTGGGTCACAGACAACATGGAAGGAGCCGCCATTGGCTTTGTGACCTTTTCATCCAATGGCACTGATGGCAGCTTTACATGCTCTAGCTCAGCCACACTTCACTTCTCATTCTACTCTAGTTTTATCATTCTCTTCACTGCACTCATCTTAAACTTCCTCACACTCATGAAACTTCAGGAGGTAGAAATCCCAGTTGTGGGCAACTCACAATGTAGCTGCCAGTATAAGCCAATAGGTGATGCTACAATCACACCACAGATGATTTGTGCTGGGAGAACAGGCAAAGGGATCTGCCATGGAGATTCTGGAGGTCCATTACAGTGCAAACAGGGTTCTGTGTGTGTCCTCTTTACGTCACGGAGAACGTGGAGGGAGCCGCCATTGGCTTTGTGACCTTTTCATCCAATGGCACTGATGGCAGCTTTACATGCTCTAGCTCAGCCACACTTCACTTCTCATTCTACTCTAGTTTTATCATTCTCTTCACTGCACTCATCTCAAACTTCCTCACACTCATAGCCACTTAAAACTGACTCACACACACATGCAATTCTGAGCTAATGTTAATGCTAAGCATGATAAGGGGAAAATTAATTGTTGACAGAGAAAATACACAGTGGAATTCTGAATGACATGAAGAAGGACATAGAATGATTAAA

Function


NR:

description
Polyserase-2 precursor

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000047_04022011_04032483.mRNA False 1439 mRNA 0.45 8 4021745 4032666

Neighbor


gene id symbol gene type direction distance location
CI01000047_03947036_03979744 NA coding downstream 41420 3946306 ~ 3980325 (-)
CI01000047_03873674_03934985 NA coding downstream 86616 3873459 ~ 3935129 (-)
CI01000047_03855710_03868781 NA coding downstream 151941 3855543 ~ 3869804 (-)
CI01000047_03785018_03800982 NA coding downstream 220741 3784742 ~ 3801004 (-)
CI01000047_03741720_03750331 MAPK7 coding downstream 271370 3741070 ~ 3750375 (-)
CI01000047_04105620_04111019 NA coding upstream 72757 4105423 ~ 4111184 (-)
CI01000047_04128025_04134725 NIF3L1 coding upstream 95236 4127902 ~ 4134725 (-)
CI01000047_04137872_04142531 CABP5B, CABP5, CABP5A coding upstream 104933 4137599 ~ 4142531 (-)
CI01000047_04213574_04213976 NA coding upstream 180755 4213409 ~ 4214085 (-)
CI01000047_04285605_04286644 COA3A coding upstream 252561 4285227 ~ 4286694 (-)
G203059 NA non-coding downstream 66471 3949616 ~ 3955274 (-)
G203046 NA non-coding downstream 110960 3880878 ~ 3910785 (-)
G203041 NA non-coding downstream 114665 3864516 ~ 3907080 (-)
G203051 NA non-coding downstream 115521 3905622 ~ 3906224 (-)
G202959 NA non-coding upstream 12044 4044710 ~ 4052438 (-)
G202934 NA non-coding upstream 43253 4075919 ~ 4086107 (-)
G203082 NA non-coding upstream 59043 4091709 ~ 4091935 (-)
G203084 NA non-coding upstream 60512 4093178 ~ 4093411 (-)
G203085 NA non-coding upstream 60753 4093419 ~ 4093621 (-)
G202944 NA other downstream 35343 3985342 ~ 3986402 (-)
G202733 NA other downstream 888093 3132313 ~ 3133652 (-)
CI01000047_01708628_01744282 BICC1B, BICC1 other downstream 2306228 1706068 ~ 1744282 (-)
G200472 NA other downstream 3187274 833941 ~ 834471 (-)
CI01000047_00519408_00522108 PYYB other downstream 3499503 519108 ~ 522245 (-)
CI01000047_04575184_04576337 GNGT2B, GNGT2 other upstream 541669 4574335 ~ 4576342 (-)
G203286 NA other upstream 841713 4874379 ~ 4876734 (-)
G203840 NA other upstream 1885842 5918508 ~ 5927344 (-)
G203042 NA non-coding downstream 148542 3866163 ~ 3866531 (-)

Expression



Co-expression Network