CI01000047_04198702_04207295 (FAM57B, FAM57BB)


Basic Information

Item Value
gene id CI01000047_04198702_04207295
gene name FAM57B, FAM57BB
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 4198702 ~ 4207405 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000047_04198702_04207295.mRNA
AATTGTCTGAATCTTCTAACAAACAATTAACAGATCCCACATGCGTTCTCATTTTGTTCTCCGGAGGGACGAACTCTCCGTTCCGCTCATTGTTTTTGTCACAACAAGAGCGTGAAATCCGCACCTCAGATGGTCTGACGGTGCTCTCAAGCACTCCACTGACCTACATAACAACAGCATATGGGTGGAAAGTTCTTCACTCCATTTTGTTACAGAAGGGGGAGCCGGACGGGAGATCTGCGGAGGGCTTTTTTGAACACAGTATTATCAGAGTTCACCTACGAGGGACCATGTTGTCCATCTTAGCGGCGGGGTCGGTGTTCTTCCCGGGCCTTTTCCTGTTGTCCAAGCACTGTCTCAAATCCATCCCTGGACTGCGGTGGAGTGAGGGTGATGCCGTCATCGTTTCAGCCAGGTTGGTGTCATCCATCCAAGCTATTATGGCTTCTACAGCTGGTTACATCATCTCCTCATCCTGTCAGGACATCATTGAGGACCAACACTGGCTGACCTGCTCCTACATATGGTTTGCTGTGCCGTACTTTGTGTATGACATCTACGCCATGTTCCTGTGTTACTGGCACAAGTTCCAGGTCAAAGGGCACGAGGTGGACAACGGCTCCAAATCCAAGGCTATGGCTGTCAGTGGCTATCTCCGGCGAGAGTTCCTCATGATCTTACATCACGTTGTCATGGTCACCGCTTGCTTCCCCATCTCTGTGTTCTGGAGGCAGGGAAAGGGCGATTACTTCCAGGGTGTCATGTTCATGGCTGAACTCAGCACACCGTCCGTCTGTCTGGGAAAAATCCTCATCCAGTACAAGCAACAGCACACACTTCTTCACAAAGTGAATGGAGCTGTTATGCTGATCACTTTCTTCCTCTGTCGAGTCCTTCTCTTCCCCTATCTCTACTACGTTTATGGAAGGTATGCCTCTATTCCCTTCTACCGGGTTCCTTTTGAGGTGCCCTGGCAGTGTAATCTCGGAGCGGCTCTCCTCATGGCCCCGCAGCTCTACTGGTTCTCCCTGATCTGCAGGGGGGCACTGCGCCTGTTTACCGGCCGATCCTCGCGCTCCCGCAAACCGACGGCTCCGGTCAAGCCCGATTACGAAGGACATGAGCCAATGACTCAGTCGGCCAATGGATACAGTACACAGATGGTGGGTCGGGACACACCCACAATGTCTCACTGAGGGGAGGAGCTTATGCAAATGAGACTAAGCTAAGAAGAAAGGGGATTGGATGAACACAATGATGAAGAGACTGAGCAGAAGAGCAGGTTGCCAAGGAAGTACAAGAGTGA

Function

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000047_04198702_04207295.mRNA True 1306 mRNA 0.51 7 4198702 4207405

Neighbor

gene id symbol gene type direction distance location
CI01000047_04183386_04192887 MAZ coding upstream 5676 4183386 ~ 4193026 (+)
CI01000047_04153298_04179343 TAOK2A, TAOK2, TAOK2B coding upstream 17836 4153298 ~ 4182449 (+)
CI01000047_04120765_04127370 NA coding upstream 71069 4120765 ~ 4127633 (+)
CI01000047_04096532_04103860 PRODH2 coding upstream 94825 4096532 ~ 4103877 (+)
CI01000047_04075849_04088601 EIF3CL, EIF3C, EIF3C.L coding upstream 109785 4075849 ~ 4088917 (+)
CI01000047_04214987_04217836 VPS25 coding downstream 7582 4214987 ~ 4218477 (+)
CI01000047_04222867_04253291 NA coding downstream 15277 4222682 ~ 4253711 (+)
CI01000047_04471595_04476690 SGCA coding downstream 263720 4471125 ~ 4477217 (+)
CI01000047_04582184_04586359 TMEM101 coding downstream 374599 4582004 ~ 4586796 (+)
CI01000047_04606043_04610846 G6PC3 coding downstream 398638 4606043 ~ 4611322 (+)
G201526 NA non-coding upstream 133880 4063009 ~ 4064822 (+)
G201520 NA non-coding upstream 201346 3996459 ~ 3997356 (+)
G201509 NA non-coding upstream 266804 3907608 ~ 3931898 (+)
G201508 NA non-coding upstream 267020 3907414 ~ 3931682 (+)
G201555 NA non-coding downstream 79374 4286779 ~ 4349774 (+)
G201581 NA non-coding downstream 95169 4302574 ~ 4305252 (+)
G201609 NA non-coding downstream 201113 4408518 ~ 4408772 (+)
G201613 NA non-coding downstream 212779 4420184 ~ 4425415 (+)
G201599 NA non-coding downstream 270946 4415813 ~ 4482457 (+)
G201387 NA other upstream 496842 3696516 ~ 3701860 (+)
G201186 NA other upstream 1110515 3018705 ~ 3088187 (+)
G200076 NA other upstream 1620705 2520596 ~ 2577997 (+)
G200003 NA other upstream 1879740 2316863 ~ 2318962 (+)
CI01000047_01749606_01752688 NA other upstream 2445865 1749606 ~ 1752688 (+)
G202382 NA other downstream 2608312 6815717 ~ 6816118 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location