CI01000047_04345335_04375341


Basic Information

Item Value
gene id CI01000047_04345335_04375341
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 4345127 ~ 4375434 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000047_04345335_04375341.mRNA
ATATATTTATTGCTATGTATTCTATAGGAGTCATGATTGTATATTTCTATATGCATTTTCTCCTTAGAGCCAACTGAATCTGCTTTCATTACAATGGAGTATCTGAAGTACCTGATGCTGATATTTCTCATCCCACAGGGCTGTGGGGTTTCCTCACTGAACACTCGTATTGTGGGAGGTGAGGATGCACCTGCAGGGAACTGGCCTTGGCAGGTCAGTCTACACGTTTTTGACCATCACATCTGTGGAGGATCCCTCATCAGCCATGAATGGGTGCTCACTGCAGCTCACTGTGCTTCCTTCTCACCCCCAGCCAGATACTGGACTGTTTATCTGGGCAGACAGAGCCAAAACATTTCAGTCTCTAACCCAAATGAGGTGAGTCGAGGAGTCCAATCCATCATTAAACATCCAGACTACGACCCGTATCAGTTGACCAATGACATCGCCTTGCTGAGATTGAGTGAGCCGGTGAACTTTACCAGCTACATCAACCCAATCCGCCTGGCTGCTAATGACAGTGTCTTTCACAACGGCACCACCTGCTGGTCCACTGGATGGGGAGAAACCGGCTTTGCAGGTGCTGAGCCCAATTCTGGAACTCTACAGGAAGTGAAAGTAAATGTGGTGGGGAATAAGGAGTGTGACTGCAGGTTTCAAGACGTTCCATTTTGGGACATACCAATCACTCCAACAATGATCTGTGCTGGAGGAGAAACAGGCAAAGGAACATGTTTTGGAGATTCTGGTGGTCCATTACAGTGTGAGCAGGATTCTGCATGGATCTTAGCCGGTGTCACTAATTTTGGGGTTCCTTGCGGCACTGGAACTACACCTGACGGTTATGCTAGAGTATCCGAATTCCAAAACTGGATCTTGGAAAATGTTAATGGATCAGACATTGGATTTGTGACTTTTAAATCTAATGGTGAAAATACAGACAGCAGCTTTCTGTGCTATGGAGAAGAGACAGGCCTTTTCTACCCATTTGGAAATGGAGACATAGAGAATCCCTCTGAAGATGATGGAAGCTCTCCAATAGTATTCTTGGAAAAGCCCTTTGTATATTTTGGACGTGTTTATCGACAGACTTATGTTAATAACAATGGGCATTTGACATTTGATGAGCCTCTTTCAGAGCCAGTACCCAATTATTTACTGTCGCAAGTCAACAGAGACATCATTGCTCCACTTTGGACAAACATGGACAACACTGTCAATGGAACCATCTCCTATCGTCAGGTCACCAGAGGTGGACTCTTACTAGCAGCCTCAAACCACATAAACCAGTATTTTCCCAATCTGAACTTCACTGCTTCATGGCTATTCATTGCTACTTGGGATAAAGTACCATACTTGAACAACTCACAATCGAGTTCATCTTTCCAAGTTGTTTTGGTCTCTGGTGGCTCTCTGTCTTTTGTCATGATGAACTACGGAAATATCTCCTCTACGGATCAATGGTTTCAGGCTGGCTATGGCACAATAGACTCAACAAATTATTCCTCAATCCCTGTGCCTGATGAAAATAAGCTGTCCAACTCCAGCAATGTCAATGTCCCGGGACGCTGGGCATTCCGCGTTGATGGTGGACCTGAAGAGGGAATTTTCTACCCGTATGGAGATGAGGATATAAAGAACCCTGCAGAGGATTTTGGAAGTTCTCCACTGATCACCCTGGAGCAGCCATTTGCCTACTTTGGGCTTGTTTATAATCAACTATATGTGAATAACAAGGGTTACTTGAATTTTGAAGGACCTTTTCACCAGTGGTATCCCAATAATTTTCCTGCATACTCGACTAGAGACATCATCGCTCCACTGTGGACAGACATTGACATTACACGCAAAGGAATCATCTCTTACAGACAAGTAACAGATGGTCATCTCTTAAACCGGGCCTCTAGAGACATAAACCAATATTACCCCAACCTGAACTTCTCTGCCTCGTGGGTTTTCATTGTAACATGGGATAAAGTACCGTACTATAGATACAGGCGGACAGAGTCGACCTTTCAAGTGGTTTTGGTGTCTGGCAAAAACATGTCATTCACACTTATGCATTATGGTCCGATTTCCCCGGCCATATATCCTGTTATGTCCGGCTATGACACAAGTGATTCAACTGATTTCTTTTCAATTCCCGTCTCTGACACCACAAACCTGCCATACACAAGCAATGTCAACGTCATGGGTCGATGGGTATTTCGAACTGACACTACATCAGAACACAATGGACTGTTCTATCCATTTAGGAATGGGCACAAACTTCAACAGTATTATGGATTTGGATTATTTGGATTTTCAAGCAATCTCTATTTGCAGACACCATTTACTTACTTCGGGCTCACATACAGCTATATTTATGTTTACAATAATGGATTTCTTACTTTTAACCGGCAATTGTTTCCTTCAAGTCCACAAACTCTTCCAGCTTACACAAATATGGACATTGTTGCTCCACTATGGACAGATATTGACAACAGTGACTTTTACTATCAAGAATTCAGTGGCGTCCGAGTACTACAGCGAGCTACAAATGATATACGTCAATATTTTCCTCAAACAAATTTCACTGCCGAGTCGGTTTTTGTTTGTACTTGGGATAATGTGAGATATTATAACACTTCAGCAGAGAATTCCTCTTTTCAAGTACTGCTGATCTCAGGATCTGGTTTGTCATTTATTGTATTTAATTATGGCAGTATTCCACAAACTGAGCATACTGCAGTGGCTGGATATGACACTATTGATTCAACCAGTTATTATACAATTCCTGTGTCTAACATCGCTAATCTGACACACTTCACGAATGTCAATGTTATGGGCCGCTGGGCTTTTCATGTCGACACAACAAAACTTGGTAATACATTTTTTCTGTCTTCCTCTAAACTTTATTCAGTTTTAATCGTTTTATGTCCCAAGGCCATAACATGCAATGACATGTTTTTTCCAGGTTTGTTTTATCCAGCTGGCTCTTCGGTCTCTCAGAATCCCTGTCAAAGTAATGCAACCTCACCAGCTGTGAACTTGCAGTATCCTTTCTTGTACTTTGGACGCAAATACCAGAACATATATGTCAACAATAATGGACATTTGACGTTTGATGAACCATTTTATGAAAGACTCCCTAAGGCTTTCCTTGCCAACTCTACTAGAGACATTATAGCTCCACTCTGGGCAATGTTTGACTGTAGTGTCAGTGGAAGAATCTCATACCGGTTAGTAACTCAAGGCCGTATTCTGGACCAGGCGAGAAATGATGTCAAACAGTATTTCCCTCAGTTTGGGTTCTCAGTACATACAGTCCTCATTGCTACTTGGGATAGAGTGCCCTACGTGAACAACTCTTTGACGGTGAATAATAATGGAGACCTGACCTTTGATGAGCCACTCTACCAAAATGATCCCTATTATTTTCCTGCATGCTCGACTAGAGACATCATCACTCCACTGTGGACAAACATTGATAATAGTGAGAGAGGAACCATCTCTTACCGACAAGTATCAGATGGTCATCTCTTGAATCGGGCTTCAAGAGACATAAACCAATATTTTCCCAACTTGAACTTCTCTGCCTCGTGGGTTTTTATTGCTACATGGGATAAAGTACCGTATTATGGAAACAGTGAATCAGAGTCGACCTTCCAGGTGGTTTTGGTGTCTGGAAAAAACCTGTCGTTTACACTCATGCATTATGATCAAATCACCTCCACCTATGCTGTAGAGTCTGGATATGACACAATGTGCTCTACTAATTTCTTTTCAATTAATGTTTCTGACATCACAAACTTGTCATACACAAGTAATGTCAACGTCATGGGTAGATGGGTATTTCGTGTTGACAATTCATCAGAAAGAAATGGATTTTGTGACAGAACTAACCCTCAAGCCTCAGATAATCTTCCCAGCGCTCAGGTGTGTGGAAGAACCGCATTTACCACCAGCAGCAGGATAGTAGGAGGTCAGAACGCTTCAGCTGGACACTGGCCGTGGCAGGCTAGCCTGACTCTGTACGGCAATCACTTCTGTGGAGGTTCTCTCATCAACAAAGAGTGGGTGATGACCGCTGCCCATTGTGTTGAGGGCTTCACCAATGATGCTATATTTTCTTTAACTGTGGTTTTGGGGCGTCAGACCCAGGAAGGCTTCAACCCGAACGAAGTGTACAGAAATGTGAGGACAGTCATCAAACATCCCAGTTACAACTATCTTACAAATGACAATGATATCGCTCTGCTCAAATTGAGCTCTCCCGTCAACTTCACTGATTACATCAGCCCCGTGTGTCTAGCAGCTGATGGCAGTGTGTTTAACAGCGGCACAGAGAGCTGGATCACTGGATGGGGAAACATTGATGAAGGAGTGTCCCTCCCATCCCCTAATGTTCTACAAGAAGTGGAGGTTCCTGTAATTGGTAACAGACAGTGCAACTGCCTCTATGGAGTTGGAGAGATAACAGACAACATGATCTGTGCTGGTCTACTGGAGGGAGGCAAGGACTCATGTCAGGGAGATTCAGGAGGTCCGATGGTGAGCAGGCAGAGCTCTGTATGGGTCCAGTCCGGTATCGTTAGCTTTGGGTTTGGCTGTGCTCGACCTGAATATCCCGGTGTTTACACCAGAGTATCCCGCTATCAGGAATGGATCACCTCCTTCATGTGCAGCGATCCTCCAGGAAATCAGATGACTGACCCAGATATTTCTTAATCCACCAGCTGTTGCTGCATTTAGACTGGATATTTGTATTATATTTACATATATTTGCAACTGTGTTACATCAAGAAAAAAAAAAAAAACTATTGATATGATGATTTTTGCCTGCATCCAATTTCTAAAAACTGATGGGAAAAAAAGTTCTGGGAAAAAAACACATATAAAAACAAAGGGAATACAAAAATTGAAATTCGTAAATAAA

Function

NR:

description
serine protease 27, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000047_04345335_04375341.mRNA True 4918 mRNA 0.43 27 4345127 4375434

Neighbor

gene id symbol gene type direction distance location
CI01000047_04289186_04338565 NA coding downstream 5357 4289063 ~ 4339770 (-)
CI01000047_04285605_04286644 COA3A coding downstream 58433 4285227 ~ 4286694 (-)
CI01000047_04213574_04213976 NA coding downstream 131151 4213409 ~ 4214085 (-)
CI01000047_04137872_04142531 CABP5B, CABP5, CABP5A coding downstream 202596 4137599 ~ 4142531 (-)
CI01000047_04128025_04134725 NIF3L1 coding downstream 210402 4127902 ~ 4134725 (-)
CI01000047_04385029_04397861 NA coding upstream 9113 4384547 ~ 4397861 (-)
CI01000047_04398951_04431817 NA coding upstream 23517 4398951 ~ 4431817 (-)
CI01000047_04458864_04461672 NA coding upstream 83337 4458771 ~ 4462094 (-)
CI01000047_04479638_04501854 NA coding upstream 103807 4479241 ~ 4501973 (-)
CI01000047_04555399_04568166 NA coding upstream 179388 4554822 ~ 4568320 (-)
G203143 NA non-coding downstream 125394 4219397 ~ 4219733 (-)
G202991 NA non-coding downstream 168357 4130712 ~ 4176770 (-)
G202997 NA non-coding downstream 250235 4094355 ~ 4094892 (-)
G203085 NA non-coding downstream 251506 4093419 ~ 4093621 (-)
G203084 NA non-coding downstream 251716 4093178 ~ 4093411 (-)
G203189 NA non-coding upstream 33039 4408473 ~ 4408827 (-)
G203191 NA non-coding upstream 44725 4420159 ~ 4425359 (-)
G203204 NA non-coding upstream 126771 4502205 ~ 4502522 (-)
G203217 NA non-coding upstream 160907 4536341 ~ 4536570 (-)
G203219 NA non-coding upstream 170135 4545569 ~ 4546216 (-)
G202944 NA other downstream 358725 3985342 ~ 3986402 (-)
G202733 NA other downstream 1211475 3132313 ~ 3133652 (-)
CI01000047_01708628_01744282 BICC1B, BICC1 other downstream 2629610 1706068 ~ 1744282 (-)
CI01000047_04575184_04576337 GNGT2B, GNGT2 other upstream 198901 4574335 ~ 4576342 (-)
G203286 NA other upstream 498945 4874379 ~ 4876734 (-)
G203840 NA other upstream 1543074 5918508 ~ 5927344 (-)
G203881 NA other upstream 1667819 6043253 ~ 6043789 (-)

Expression


Co-expression Network