CI01000047_04398951_04431817


Basic Information

Item Value
gene id CI01000047_04398951_04431817
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 4398951 ~ 4431817 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000047_04398951_04431817.mRNA
CTCAGCACTGTGGGGTTTCCTCACTGAACACTCGTATTGTGGGAGGTGAGGATGCACCTGCAGGGAACTGGCCTTGGCAGGTCAGTCTACACATTTTTGACCATCACATCTGTGGAGGATCCCTCATCAGCCCTGAATGGGTGCTCACTGCAGCTCACTGTGTTTCCTTCTCACCCCCAGCCCGTAACTGGACTGTTTATCTGGGCAGACAAAGCCAAAACATTTCAGTCTCTAACCCAAATGAGGTGAGTCGAGGAGTCCAATCCATCAATCCACATCCAGACTTTGACCCTTCACAGTTGACCAATGACATCGCCTTGCTGAGATTGAGTGAGCCGGTGAACTTTACCAGCTACATCAGCCCAATCTGCCTGGCTGCTAATGACAGTGTCTTTCACAACGGCGCCACCTGCTGGTCCACTGGATGGGGAGAAACCGGCTTTGTAGGTGCACAGACTGGAACTCTGCAGGAAGTGAAGGTAAATGTGGTGGGGAATAAGGAGTGTGACTGCATGTTTCAAGACATCCCATTTTGGGACATACCAATCACTCCGACAATGATCTGTGCTGGAGGAGAAACAGGCAAAGGAGCATGTTTTGGAGATTCTGGTGGTCCATTACAGTGTGAGCAGGATTCTGTATGGATCTTAGCCGGTGTCACTAGTTTTGGGTTTCCTTGTGCCACTGGATTTGCTCCTGACAGTTATGCTAGAGTATCTGAATTCCAAAACTGGATCTTGGAAAATGTTAATGGATTAGACATTGGATTTGTGACTTTTAAATCTGAAGGTGAAAATACGGACAGCAGCTTTCTGTGCTATGGAAATGAGACAGGTCTTTTCTACCCATTTGGAAATGGAGACATACAGAATCCCTCTGAAGATGATGGAAGCTCTTCAATAGTATTCTTGGAAAAACCTTTTGTATATTTTGGACGTGTTTATCGACAGACTTATGTTAATAACAATGGGTATTTGACATTTGATGAGCCTCTTTCAGAGCCAATACCCAATCATTTACTGTTGCAAATCAAAAGAGACATCATTGCTCCACTTTGGACCAACATGGACAACACTGTCAATGGAACCATCTCCTATCGTCAGGTCACCAGAGGCAGACTCTTACTAGCAGCCTCAAACCACATAAAGCAGTATTTTCCCAATCTGAACTTTACTGCTTCATGGCTGTTCATTGCCACTTGGGATAAAGTACCATACTTTAACAACTCAAAATCGAGTTCATCTTTTCAAGTTGTTTTGGTCTCTGGTGGCTCTCTGTCTTTTGTCATGATGAACTATGGAAATATCTCCTCTACGGATCAATGGTTTCAGGTGAATAATAACGGAGACCTGACCTTTGATGAGCCACTTTCCCAGGGGATTCCCAATTATATTCCTGCATATTTGACTACAGACATCATCGCTCCACTGTGGACAGACATTTATAATAGTGAGAGAGGAACCATCTCTTACCGACAAGTAACAGATGGTCCTCTCTTGAATCGGGCTTCAAGAGACATAAACCAATATTTTCCCAACTTGAACTTCTCTGCCTCGTGGGTTTTTATTGCTACATGGGATAAAGTACCGTACTTTGGAAACAGAGAGGCAGAGTCGACCTTCCAAGTGGTTTTGGTGTCTGGAAAAAACCTGTCATTTACACTCATGCATTATGATCAAATCACCTCCACCTTTCCTGTAGAGTCCGGCTATGACACAATTTACTCTACTAATTTCTTTTCAATTCCTGTTTCTGACATCACAAACCTGTCATACACAAGTAATGTCAACGTCATGGGTAGATGGGTATTTCATGTTGACAATTCATCAGAGAGAAATGGATTTTGTGACAGAACTAACCCTCAAG

Function

NR:

description
Polyserase-2 precursor

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000047_04398951_04431817.mRNA True 1866 mRNA 0.44 11 4398951 4431817

Neighbor

gene id symbol gene type direction distance location
CI01000047_04385029_04397861 NA coding downstream 1090 4384547 ~ 4397861 (-)
CI01000047_04345335_04375341 NA coding downstream 23517 4345127 ~ 4375434 (-)
CI01000047_04289186_04338565 NA coding downstream 59181 4289063 ~ 4339770 (-)
CI01000047_04285605_04286644 COA3A coding downstream 112257 4285227 ~ 4286694 (-)
CI01000047_04213574_04213976 NA coding downstream 184975 4213409 ~ 4214085 (-)
CI01000047_04458864_04461672 NA coding upstream 26954 4458771 ~ 4462094 (-)
CI01000047_04479638_04501854 NA coding upstream 47424 4479241 ~ 4501973 (-)
CI01000047_04555399_04568166 NA coding upstream 123005 4554822 ~ 4568320 (-)
CI01000047_04575184_04576337 GNGT2B, GNGT2 coding upstream 143174 4574335 ~ 4576342 (-)
CI01000047_04589853_04594533 NA coding upstream 157953 4589770 ~ 4594636 (-)
G203143 NA non-coding downstream 179218 4219397 ~ 4219733 (-)
G202991 NA non-coding downstream 222181 4130712 ~ 4176770 (-)
G202997 NA non-coding downstream 304059 4094355 ~ 4094892 (-)
G203085 NA non-coding downstream 305330 4093419 ~ 4093621 (-)
G203084 NA non-coding downstream 305540 4093178 ~ 4093411 (-)
G203204 NA non-coding upstream 70388 4502205 ~ 4502522 (-)
G203217 NA non-coding upstream 104524 4536341 ~ 4536570 (-)
G203219 NA non-coding upstream 113752 4545569 ~ 4546216 (-)
G203221 NA non-coding upstream 118203 4550020 ~ 4550257 (-)
G203258 NA non-coding upstream 370080 4801897 ~ 4802226 (-)
G202944 NA other downstream 412549 3985342 ~ 3986402 (-)
G202733 NA other downstream 1265299 3132313 ~ 3133652 (-)
CI01000047_01708628_01744282 BICC1B, BICC1 other downstream 2683434 1706068 ~ 1744282 (-)
G203286 NA other upstream 442562 4874379 ~ 4876734 (-)
G203840 NA other upstream 1486691 5918508 ~ 5927344 (-)
G203881 NA other upstream 1611436 6043253 ~ 6043789 (-)

Expression


Co-expression Network