Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000047_04458864_04461672 |
| gene name | NA |
| gene type | coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000047 |
| NCBI id | null |
| chromosome length | 7523058 |
| location | 4458771 ~ 4462094 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| Retrovirus polyprotein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000047_04458864_04461672.mRNA | True | 1730 | mRNA | 0.42 | 4 | 4458771 | 4462094 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000047_04398951_04431817 | NA | coding | downstream | 26954 | 4398951 ~ 4431817 (-) |
| CI01000047_04385029_04397861 | NA | coding | downstream | 60910 | 4384547 ~ 4397861 (-) |
| CI01000047_04345335_04375341 | NA | coding | downstream | 83337 | 4345127 ~ 4375434 (-) |
| CI01000047_04289186_04338565 | NA | coding | downstream | 119001 | 4289063 ~ 4339770 (-) |
| CI01000047_04285605_04286644 | COA3A | coding | downstream | 172077 | 4285227 ~ 4286694 (-) |
| CI01000047_04479638_04501854 | NA | coding | upstream | 17147 | 4479241 ~ 4501973 (-) |
| CI01000047_04555399_04568166 | NA | coding | upstream | 92728 | 4554822 ~ 4568320 (-) |
| CI01000047_04575184_04576337 | GNGT2B, GNGT2 | coding | upstream | 112897 | 4574335 ~ 4576342 (-) |
| CI01000047_04589853_04594533 | NA | coding | upstream | 127676 | 4589770 ~ 4594636 (-) |
| CI01000047_04596548_04605172 | LSM12A, LSM12, LSM12B | coding | upstream | 133886 | 4595980 ~ 4605172 (-) |
| G203191 | NA | non-coding | downstream | 33412 | 4420159 ~ 4425359 (-) |
| G203189 | NA | non-coding | downstream | 49944 | 4408473 ~ 4408827 (-) |
| G203143 | NA | non-coding | downstream | 239038 | 4219397 ~ 4219733 (-) |
| G202991 | NA | non-coding | downstream | 282001 | 4130712 ~ 4176770 (-) |
| G202997 | NA | non-coding | downstream | 363879 | 4094355 ~ 4094892 (-) |
| G203204 | NA | non-coding | upstream | 40111 | 4502205 ~ 4502522 (-) |
| G203217 | NA | non-coding | upstream | 74247 | 4536341 ~ 4536570 (-) |
| G203219 | NA | non-coding | upstream | 83475 | 4545569 ~ 4546216 (-) |
| G203221 | NA | non-coding | upstream | 87926 | 4550020 ~ 4550257 (-) |
| G203258 | NA | non-coding | upstream | 339803 | 4801897 ~ 4802226 (-) |
| CI01000047_04213574_04213976 | NA | other | downstream | 244341 | 4213409 ~ 4214085 (-) |
| G202944 | NA | other | downstream | 472369 | 3985342 ~ 3986402 (-) |
| G202733 | NA | other | downstream | 1325119 | 3132313 ~ 3133652 (-) |
| CI01000047_01708628_01744282 | BICC1B, BICC1 | other | downstream | 2743254 | 1706068 ~ 1744282 (-) |
| G203286 | NA | other | upstream | 412285 | 4874379 ~ 4876734 (-) |
| G203840 | NA | other | upstream | 1456414 | 5918508 ~ 5927344 (-) |
| G203881 | NA | other | upstream | 1581159 | 6043253 ~ 6043789 (-) |
