XLOC_009446 (si:dkey-238d18.15)


Basic Information

Item Value
gene id XLOC_009446
gene name si:dkey-238d18.15
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 37927949 ~ 37929135 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00018558
GTTGAAGATCAGAGCCATTATACTATTTAATCCTATTTTCCCACAATCCAGTCAAAGATCAGAAACAATTAATCTAAAGCAAAGCTGTTGATTCCACTTAATGCGAGATACAACTGGAAGTTTACTATAAACTCTCCTCATTACCTCTATTTAAATCAAAACCTGACTGCAAACCAACCAGGACATCCATTCCAGATCAGCTCAGAACTTAACACTTAACGATATATACCATGGGTAATGGATCATCAAAGCCTCTTATGACTCAGGACCCAGTACCAAATTTTAGGAGAAATGAAAAACTGACAAAGGATACCCCAAATGATAATGTTCCTTTTGGAAATGCTGTACAGAAAGACAAAAACTGGAAAGTACTGTCAAAGAAAAACTGCAGAGTGGCGAAGCTAAATCTTGCAGCAGGCAATCGCATCCGTTACTCCAGCCTACCATCAGCCCTGGAGCCTGAAGAACAGGAACTCATTTCAGAGCAAAAATGGGAACTGTGTAACCCTGCCTTTGTGGAGGACAAAAACTCAAAGTAATGAGCATACTGACATCTAGTGGACAACCGCTTAAAAAGGATAAGAATTTTTTATATCAGCGTTACCTGGGACTTCAAGGGTTTTTTCATTGCCAGTGCAACAGTCATGACTTTAGATGAATTGCATTTCTTTATAGCATATCTGTCATTTGGCATGTCTTTCCAATCTTTGTATCTGAAGAATTTATTCTTCATATAAGAAGTGTGTATTGGGACTGAACACTCTCTGCATACACTGTactgtaataaaaatatgaacttaaatGATGCATTTGCTAACAAATTGTATAAGATTTTTCCAAATACAAAGTTGTAGTTTGtatctttctttgtttttatttgcatggATCTATCTTTAGAATAAACGTCACTTGTTTGATGTGTTTTCGTATTTGATGCTCACAGAATTCAATGACTTTCAATTTTATAATCTCACATATTCATCTCTACAAAAATGAAGTTCTCACATCTTAACAATAAATCCTAATGACTTTACTTGAA

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-141216-436 No description available

Ensembl:

ensembl_id ENSDARG00000101197

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00018558 True 1039 mRNA 0.35 2 37927949 37929135

Neighbor

gene id symbol gene type direction distance location
XLOC_009445 si:dkey-238d18.5 coding downstream 5951 37891045 ~ 37921998 (-)
XLOC_009444 CR944667.3 coding downstream 47062 37876716 ~ 37880887 (-)
XLOC_009443 si:dkey-238d18.4 coding downstream 52348 37854483 ~ 37875601 (-)
XLOC_009442 si:dkey-238d18.3 coding downstream 76980 37831604 ~ 37850969 (-)
XLOC_009441 ctrl coding downstream 98789 37820258 ~ 37829160 (-)
XLOC_009447 si:dkey-238d18.6 coding upstream 79367 38008502 ~ 38009344 (-)
XLOC_009448 si:dkey-24p1.1 coding upstream 172000 38101135 ~ 38129845 (-)
XLOC_009449 irgq2 coding upstream 221330 38150465 ~ 38154616 (-)
XLOC_009450 si:dkey-24p1.7 coding upstream 228352 38157487 ~ 38177768 (-)
XLOC_009451 chrna10a coding upstream 250769 38179904 ~ 38193383 (-)
XLOC_009432 CR848836.1 non-coding downstream 198783 37727834 ~ 37729166 (-)
XLOC_009422 CR848749.2 non-coding downstream 663684 37259354 ~ 37264265 (-)
XLOC_009420 AL953844.1 non-coding downstream 1053583 36874251 ~ 36874366 (-)
XLOC_009419 NA non-coding downstream 1143176 36784479 ~ 36784773 (-)
XLOC_009453 NA non-coding upstream 367022 38296157 ~ 38297734 (-)
XLOC_009455 NA non-coding upstream 496413 38425548 ~ 38425845 (-)
XLOC_009456 NA non-coding upstream 618692 38547827 ~ 38550804 (-)
XLOC_009457 NA non-coding upstream 972798 38901933 ~ 38910271 (-)
XLOC_009458 NA non-coding upstream 1019288 38948423 ~ 38952429 (-)

Expression


Co-expression Network