CI01000047_04582184_04586359 (TMEM101)


Basic Information

Item Value
gene id CI01000047_04582184_04586359
gene name TMEM101
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 4582004 ~ 4586796 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000047_04582184_04586359.mRNA
GTAAAAAAACTCAGCTCATGAAGATTTTTCAGATTTAACAATACTACAGTTAATTTTTCATCTGTTGGCTGACAAGTTCTACACGAATCGTTCTACTGATTGAACCAAAAGATTCGACTCAAAAGAACGATTCGTTCACGATTCCCTAGGAAGGAGATGATACTTCCGCCATCCTGAGCCATGGCTGCTGCAACTCGCAAAAAAGCTCTGAGATTTTTCTCGCAGTTCGGAGCCTTTATCCTGACCCGATTCGGGTTCTGGAACTGCTTCAGCATGCTGATGCTGTTTGCGGAGCGCGCGGATGTGAAACGGAAGCCAGACATCCAGGTGCCTTACCTGTACATAGACTTGGGAGCTGCGGTGTTGTGTGCCAGCTTCATGTCCTTTGGGGTGAAGAGAAGATGGTTCGCTCTGGCTGCTGCCATTCACTTGGCCCTCAGCACATATGTGTCCTATGTGGGTGGACAGGTCCATTATGGTGACTGGTTAAAGGTGAGGATGTACTCCAGAGCGATTGCCATCATAGGAGGGTTTCTGGTGCTGGCCAGTGGAGCAGGAGAGGTTTACAGACAGAAACCTCGCACACGCTCACTTCAGTCCACTGGACAGGTCTTCCTGGGGATTTACTTGATATGTATGGTGTACTCTCTACAGCACAGTAAAGAGGACCGGCTGGCCTACCTGGACCATATTCCTGGTGGTGAGATCACCGTCCAGCTCCTGGTGGTTGTGTTTGGTGTGCTTGCGCTCGCCTACCTCTCGGGCTGCTACGTGCGAGTGGCCTCCCAGATCCTGGCAGTTCTGTTACCTTTGGTTGTGCTGTTCATCGATGGCAACATCGGTTACTGGCACCACACCTGCCGCGTGGAGTTCTGGAACCAGATGAAACTCATCGGGCAGAGCATCGGCATCTTTGGAGCGGTGCTTATTCTAGCCACAGACAGCTAGAGATATAGGGATATGACAACATCTCTGTACAGGCAGTGCTTAGGACAAACAGGAGAGATCGAGCATGTGTCTCAGGGGATCGTGTGAGTTAAAGAAACTGTGTGTACACTCAAAGGTGCAGAGGATACAATTCCCAGCTTGCTCTGGAGTCTCCGATCGCAAGCACAAAGTCTTCAAAAGACAGTTTACATTGCATTTGTTCTCTTTTTAATGCATTATTTAAAGTTTAAGAACGACTAGAAGTCTTAAATTAAATTAAAGTTGAATGATGAATTAAGGGGAGTTTGGAAACACATTATTGTCATTTTTGGTGTTCTTAAGTTGTATAGTAATGTGGGATTTTTCCCATGTTACAGACATTTAAAATGCCACTGCATTTTTTGCTGCTTGTATTTAGTTTGCATTCCTTATACAACTTCTATAAAATCAGAATGTCA

Function

symbol description
tmem101 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM101 (transmembrane protein 101).

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000047_04582184_04586359.mRNA True 1385 mRNA 0.46 4 4582004 4586796

Neighbor

gene id symbol gene type direction distance location
CI01000047_04471595_04476690 SGCA coding upstream 104787 4471125 ~ 4477217 (+)
CI01000047_04222867_04253291 NA coding upstream 328293 4222682 ~ 4253711 (+)
CI01000047_04214987_04217836 VPS25 coding upstream 363527 4214987 ~ 4218477 (+)
CI01000047_04198702_04207295 FAM57B, FAM57BB coding upstream 374599 4198702 ~ 4207405 (+)
CI01000047_04183386_04192887 MAZ coding upstream 388978 4183386 ~ 4193026 (+)
CI01000047_04606043_04610846 G6PC3 coding downstream 19247 4606043 ~ 4611322 (+)
CI01000047_04663268_04663847 NA coding downstream 75519 4662315 ~ 4663996 (+)
CI01000047_04678392_04690824 NA coding downstream 91196 4677992 ~ 4691097 (+)
CI01000047_04826817_04834995 NA coding downstream 240021 4826817 ~ 4835216 (+)
CI01000047_04845691_04876128 LMF1 coding downstream 258895 4845691 ~ 4876128 (+)
G201607 NA non-coding upstream 5064 4574335 ~ 4576940 (+)
G201642 NA non-coding upstream 34549 4547252 ~ 4547455 (+)
G201641 NA non-coding upstream 35867 4545893 ~ 4546137 (+)
G201639 NA non-coding upstream 41503 4540299 ~ 4540501 (+)
G201599 NA non-coding upstream 101226 4415813 ~ 4482457 (+)
G201605 NA non-coding downstream 13502 4600298 ~ 4603661 (+)
G201658 NA non-coding downstream 33155 4619951 ~ 4623509 (+)
G201669 NA non-coding downstream 61583 4648379 ~ 4724087 (+)
G201684 NA non-coding downstream 97535 4684331 ~ 4685358 (+)
G201698 NA non-coding downstream 145530 4732326 ~ 4733589 (+)
G201387 NA other upstream 880144 3696516 ~ 3701860 (+)
G201186 NA other upstream 1493817 3018705 ~ 3088187 (+)
G200076 NA other upstream 2004007 2520596 ~ 2577997 (+)
G200003 NA other upstream 2263042 2316863 ~ 2318962 (+)
G202382 NA other downstream 2228921 6815717 ~ 6816118 (+)

Expression


Co-expression Network