CI01000047_04663268_04663847


Basic Information

Item Value
gene id CI01000047_04663268_04663847
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 4662315 ~ 4663996 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000047_04663268_04663847.mRNA
GTATAAAAACGCTTAAAAAAGGTGATTCGTTTCATTAATAGGAACCACGATTTCAACCAAACAGGCTTTTTTGCTGTTCAAAATGTTTACTGAAGAACTGAAGAAAGGATGATATTTAACAATCTGTGTTAAGATGCATCAATATAACAATAAGTAGTAATAAAAACATTTATTTGCACACTTCTTTTTTTTAACATTTTTAACAAATAGTATATTGTAATATTTTACATATTATACATATATTAACTTGTTATATATATTTTGGGTCTTTTATTATAATAATAAAATACTTTTATTCAGCAAGGACACATTAAATTGATCAAAAGTGGCATTTCTAATGTCTATTTCAAATAAATGCTGTTCTTCTGAACTTTCTATTCAGCAAAGAATCTACAACAAAAAAATATATCACAAAAAATATATCATGGCTTCCACAAAAATATGAAGCAGCACAACTGTTATCAACATTGATCATAATCAGAAATCAGCAGAATGATTTCTGAAGGATCATGTGACACTGAAGACTGGAGTCATTCAGTGTCTGAAAATTCAGCTTTGGAATAGGAATAAATTACATTTTACAATATATTCATATAGAAAACATCGATTTTTAATTTGTAATAATATTTCACAATTTTACTGTTTTTACTGTATTTTTAAATCTTACGAAATGTCTTTTAAAAGCTTTTTTCAAAAAAATTACTAAACGAAGACTACACAGAAATTTCTGTGAACATTTTCAGCGTTTTCAATTTACTGAAACTGAATTTGAACTGAAACAGACAATGAAAGATTGCGAAAACTATTAAATGATCAGGATGTGAATATAGATATGTAAATATTGAGCACAGTACTGGCGCTCGTGATCATGTGAACTGATCCAGAGATGTGATGATCAAACGAGTGATCATTCAACACACGCAGTGGCGTTTCACATTAAGCAATTCGCTGAAATGACCCACATAGGCATGCAGATGGGAGAAGAAAGCATAAAGCACTTCCTTGTCCTCCTCCTCCTCCCCCTCCGTCCTGTCATCCTTGCATTCCTGTGCTACGGAGAAGACAGATGGTTGCTATGGCAACAGGCCGTGCGAGAGTCACGGCAGGTAGTGAAGGAGCAAACTGAGCAGCATCCTAAACAACAGCGCGCCTCTGATGACAGAGAGATGGAGGGAGATGGAAGAGAACAGAGTCTCAGTACAGACCAGCTGACTCACGGGCGCAAAGATTCCACTCATTACTCATCTCACACACACAGTGCAGATGCGCCAGAAGAGAACTGTGGCGGGACAACATCTGCAAAGGTCGCGCAACGCCACCATCAAAAAGCAACATGCACATGAATCTTCAACCTTTTCATCCGGTTGAATTTTAAATGCAACTTCCCAAAAAAAATGACAACACAAAAAAAGAGATTATGAAAATGCCGAAGCTGCTCTATTTTACAAACAACAATAATGAACATCAGGTCGAGACACGATTGCTTGGTTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000047_04663268_04663847.mRNA True 1492 mRNA 0.35 2 4662315 4663996

Neighbor

gene id symbol gene type direction distance location
CI01000047_04606043_04610846 G6PC3 coding upstream 50993 4606043 ~ 4611322 (+)
CI01000047_04582184_04586359 TMEM101 coding upstream 75519 4582004 ~ 4586796 (+)
CI01000047_04471595_04476690 SGCA coding upstream 185098 4471125 ~ 4477217 (+)
CI01000047_04222867_04253291 NA coding upstream 408604 4222682 ~ 4253711 (+)
CI01000047_04214987_04217836 VPS25 coding upstream 443838 4214987 ~ 4218477 (+)
CI01000047_04678392_04690824 NA coding downstream 13996 4677992 ~ 4691097 (+)
CI01000047_04826817_04834995 NA coding downstream 162821 4826817 ~ 4835216 (+)
CI01000047_04845691_04876128 LMF1 coding downstream 181695 4845691 ~ 4876128 (+)
CI01000047_04890965_04891981 NA coding downstream 226969 4890965 ~ 4892131 (+)
CI01000047_05058628_05074146 NA coding downstream 394347 5058343 ~ 5074374 (+)
G201658 NA non-coding upstream 38806 4619951 ~ 4623509 (+)
G201605 NA non-coding upstream 58654 4600298 ~ 4603661 (+)
G201600 NA non-coding upstream 65685 4573368 ~ 4596630 (+)
G201607 NA non-coding upstream 85375 4574335 ~ 4576940 (+)
G201642 NA non-coding upstream 114860 4547252 ~ 4547455 (+)
G201684 NA non-coding downstream 20335 4684331 ~ 4685358 (+)
G201698 NA non-coding downstream 68330 4732326 ~ 4733589 (+)
G201773 NA non-coding downstream 123938 4787934 ~ 4788563 (+)
G201799 NA non-coding downstream 247290 4911286 ~ 4912745 (+)
G201722 NA non-coding downstream 283634 4947630 ~ 4961291 (+)
G201599 NA other upstream 179858 4415813 ~ 4482457 (+)
G201387 NA other upstream 960455 3696516 ~ 3701860 (+)
G201186 NA other upstream 1574128 3018705 ~ 3088187 (+)
G200076 NA other upstream 2084318 2520596 ~ 2577997 (+)
G200003 NA other upstream 2343353 2316863 ~ 2318962 (+)
G202382 NA other downstream 2151721 6815717 ~ 6816118 (+)

Expression


Co-expression Network