CI01000047_04678392_04690824


Basic Information

Item Value
gene id CI01000047_04678392_04690824
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 4677992 ~ 4691097 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000047_04678392_04690824.mRNA
ATATAAAAGTAACATAAAAAAGTAACATGCTCACATGGAGTTTGATCTGGTTCTTCACTCCACTGTCCCATTAAAAAAAGGTAAAAAGTTCTAAAAAAAAAAACACATTTTACAAATAATAGGTCCTTTTCATTGCCATTAAAGTGAAATAACTGAACATAAACATACAAGCTTGATAAAAAATGCTAATTTTAGAAGAAAATTTCAGACGGCTTTTGCGTCTGAAGACTTCATATGCTTGTTTACAATTACACACATTTAGAACCCAAAAGCCTTATATACCTCTATATTACTGTACATCTTATTGTATAGTACCTAAAGCAATTGGCATGGTTAGCTGTCAATTAAATTCAGCCTCTAGAGGGTTCAAACTGGCAGCTTTATCATAATATAACATGCAATGGCACTGCAATACAGGAGCACGAAACACCGTAGAGACGCTGTGAAAACCAAACCTGCCTTTCAGTGCCAAAGAGGCAGACAGACATTTATAATTTTGGGTAACTATCACTTAAAAAAAAGCTGTAGGGACTTTGTCCTAGAGAAACTTAGAACGCCCGTCCATTTCTTCAGATACCCACAGCTCAAGCAGTTTAGGACAGATTTTGTGCGTATGTGTGTGTTTATGTGCGTGTGGGAGGAGAGAGATTGGAAAAAGGCAGAAAGAGAGAGGTTAGGTAAGGAGATATGTGGAGGGTGGGGTTCGGTAGCTCACCATGCTCAACCCAAATCCCGCATTGGGCTGGCAGGCGGGTGTAGATCTGTCCTCCCTCTCCGTCCACGGACACGAACAGCCCCTGCGAGCGTCTCAACGATGGCCAGCTCATCCACACGCGCTACAGCACAACGTCCGGACACACACCAGCGGATATTTCCTCCAGAAGAGTCCACTGGAAGAAGGAAGGTTGGAGCGGAAGGTGGTTTACTGGAAAGGCATCAGGGAAGAATCATTCCTCGGATTCGAATAAACCAATTAAACGAAGTTGCTTTCCTGAGGCAGCCTGGCACCTCTTCGTTCTCGCACTCGGGAGAATCCCTTCGACAGAACTGGAGAGAGCGGCGATCGACGCGAGCGGAGGGAGTGAGAGAGGGAATGTGTGTCTACCGCTACAGTCCATGAATGGTGCAGTGCTGCTGTTGTCATGGTAACCACTGGGGAGGAGGCTGGTAAAGTGGTGAGGGGGAGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGGTGCTTTGCAGAGGGACACTGTGGCGCTGGAATGAGTACGGAGAGACTGGAGAAACTGGAGGCTCTGGGTCCGATACTTCAGCTGGCATGACCTCACGTTACCCTTGAAAATGCCAACTAACTGTTTATTCAACTACAAGTCCATTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000047_04678392_04690824.mRNA True 1393 mRNA 0.46 3 4677992 4691097

Neighbor

gene id symbol gene type direction distance location
CI01000047_04663268_04663847 NA coding upstream 13996 4662315 ~ 4663996 (+)
CI01000047_04606043_04610846 G6PC3 coding upstream 66670 4606043 ~ 4611322 (+)
CI01000047_04582184_04586359 TMEM101 coding upstream 91196 4582004 ~ 4586796 (+)
CI01000047_04471595_04476690 SGCA coding upstream 200775 4471125 ~ 4477217 (+)
CI01000047_04222867_04253291 NA coding upstream 424281 4222682 ~ 4253711 (+)
CI01000047_04826817_04834995 NA coding downstream 135720 4826817 ~ 4835216 (+)
CI01000047_04845691_04876128 LMF1 coding downstream 154594 4845691 ~ 4876128 (+)
CI01000047_04890965_04891981 NA coding downstream 199868 4890965 ~ 4892131 (+)
CI01000047_05058628_05074146 NA coding downstream 367246 5058343 ~ 5074374 (+)
CI01000047_05080583_05091592 NA coding downstream 388237 5079334 ~ 5091965 (+)
G201658 NA non-coding upstream 54483 4619951 ~ 4623509 (+)
G201605 NA non-coding upstream 74331 4600298 ~ 4603661 (+)
G201600 NA non-coding upstream 81362 4573368 ~ 4596630 (+)
G201607 NA non-coding upstream 101052 4574335 ~ 4576940 (+)
G201642 NA non-coding upstream 130537 4547252 ~ 4547455 (+)
G201698 NA non-coding downstream 41229 4732326 ~ 4733589 (+)
G201773 NA non-coding downstream 96837 4787934 ~ 4788563 (+)
G201799 NA non-coding downstream 220189 4911286 ~ 4912745 (+)
G201722 NA non-coding downstream 256533 4947630 ~ 4961291 (+)
G201728 NA non-coding downstream 270348 4961445 ~ 4965850 (+)
G201599 NA other upstream 195535 4415813 ~ 4482457 (+)
G201387 NA other upstream 976132 3696516 ~ 3701860 (+)
G201186 NA other upstream 1589805 3018705 ~ 3088187 (+)
G200076 NA other upstream 2099995 2520596 ~ 2577997 (+)
G200003 NA other upstream 2359030 2316863 ~ 2318962 (+)
G202382 NA other downstream 2124620 6815717 ~ 6816118 (+)

Expression


Co-expression Network