CI01000047_04790377_04795864 (CNTD1)


Basic Information

Item Value
gene id CI01000047_04790377_04795864
gene name CNTD1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 4790224 ~ 4796316 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000047_04790377_04795864.mRNA
AGTGTTGTTAGAATTATTTTATTTTATTCATGCATATTGTATTCGGACCTTTATATAACCACAGCCCTGGAATAAATTTATTCAGAAGAAAACGTTGTCCAGGCCATTTCTACATTGATGGCGTTGTCACGTGGATCATGATACTTTTCTCAACGCTACTCAGAATGGACAAATCACACAGTCGTTATGCTAATTGATGAAGGAATTAAAAAAACAAAACAAAAAAACATTTTATTGAAATTCCTCCCTAATATTTATATTCGTGTGTCTGTTATAAAGTCTTAAATTATAGGTTTAAATAATATTTTGGTATATAAATGTCTTAATTATGACAAAACCGACATTCGAATGGTAATTGGCTTTCTGAGTTAAAGGGCGCCCCCTGGAGTAAAACGAATTTTTTAGCGGTTGTTATTGTGTCTTACGTGTGGAAAATTCATTTTTACTAAGAAATGGCGACAAGTACTATGGTTTCATTGCCCACCAGGGAACAGAGAAACCTGAGGTTTGGATTGGTGTCTTTAGACATTTTAACTGACATTCTGTCCAACCTCAACAAGAGAAACAAATCCAACTTGGAGAATGTGTCAGATCTCTGTGGATGTCTCAAAGAAAGGAGAATAGTGGAGTGTGTATTTCTTCTTTGTGATGAGCTGGGACTGAACCCTGTGGTTGGATATCAGGCCATCGAAATACTGGAGAGGTTTACGGCCAAATATATTGAAGATCTAATCCGCAGCCAGAAAGGTCAGCCAATGCAAGGTGCTTCATCTGAAGACCCAGAGAACTACGAGGATCTCATCTTCCAAATACTCAAGAAGAAGCTTTTTCTCTTCATCCTCTCAAGCATTCAGATAGCCAGCAAACTGGACCTGTACTCGAATGTGGTTAACAATGATATCGCGATGAGATTTCTGCAGGCAGTCAGTTATTCTTCCTCCAAAGAGCAACTCTTGGACTCTGAGATTCTCATTTTAAAAACTCTCAACTTTAATTTGAATGTCCCAAATCCTGTAACGTATGTGGAGACCCTTTTGGAAGTGCTGGGCCATAATGAAGCGACAGTCCCTGTGGCAGAGCTGCATCACCTGTGTGTGCATGTGCTGCAGTTTATTTACCTGCAGAGGGAGACAATCTACAACTCATTGCTCATATCTGCCACCGGATGCCCCAATCCTTCTGAAGAGCAAAGAGCCAAGTTTGTGTCGGTGACGCAAGACTTAATGCTTCTGGGAGTTGGAGTCATTGCTGTGGCCGCCTTCATTCATCATATCTCAACATGGGAGAAGGTAGTGGAGGAGCTGACAGGGATAACAGGGATTTCAAGCCAGAGCATCGTGGACTTTGCGTATGTCACCCTGATGCACATCACCAAGACCAAATCCATGTGAGAAATATGAAGTGTGAGGAGCAGATTAGAGCTAGAGTACAGATATATGAAGACTGGTGATGCTGTGTACACAGCAGGGACAATATTACTTTCTATTTTGATTTCTCTCAAATTGTTGTGTTGTGAATGAACAATGTAAAGATAAAACATTAAA

Function

symbol description
cntd1 Orthologous to human CNTD1 (cyclin N-terminal domain containing 1).

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000047_04790377_04795864.mRNA True 1544 mRNA 0.40 7 4790224 4796316

Neighbor

gene id symbol gene type direction distance location
CI01000047_04703391_04706693 NA coding downstream 83531 4703038 ~ 4706693 (-)
CI01000047_04613815_04652751 TANC2 coding downstream 137473 4613815 ~ 4652751 (-)
CI01000047_04596548_04605172 LSM12A, LSM12, LSM12B coding downstream 185052 4595980 ~ 4605172 (-)
CI01000047_04589853_04594533 NA coding downstream 195588 4589770 ~ 4594636 (-)
CI01000047_04575184_04576337 GNGT2B, GNGT2 coding downstream 213887 4574335 ~ 4576342 (-)
CI01000047_04840115_04844233 SOX8, SOX8A coding upstream 43247 4839563 ~ 4844233 (-)
CI01000047_05108733_05109209 MED9 coding upstream 311688 5108004 ~ 5109256 (-)
CI01000047_05151314_05157285 NT5M coding upstream 353403 5149719 ~ 5158394 (-)
CI01000047_05219313_05222967 NA coding upstream 422874 5219190 ~ 5222990 (-)
CI01000047_05235089_05236228 SSTR2A coding upstream 437828 5234144 ~ 5236273 (-)
G203221 NA non-coding downstream 239967 4550020 ~ 4550257 (-)
G203219 NA non-coding downstream 244008 4545569 ~ 4546216 (-)
G203217 NA non-coding downstream 253654 4536341 ~ 4536570 (-)
G203204 NA non-coding downstream 287702 4502205 ~ 4502522 (-)
G203191 NA non-coding downstream 364865 4420159 ~ 4425359 (-)
G203258 NA non-coding upstream 5581 4801897 ~ 4802226 (-)
G203298 NA non-coding upstream 86337 4882653 ~ 4882903 (-)
G203323 NA non-coding upstream 139190 4935506 ~ 4948267 (-)
G203303 NA non-coding upstream 177980 4974296 ~ 4978735 (-)
G203355 NA non-coding upstream 192841 4989157 ~ 4989456 (-)
CI01000047_04285605_04286644 COA3A other downstream 503543 4285227 ~ 4286694 (-)
CI01000047_04213574_04213976 NA other downstream 575794 4213409 ~ 4214085 (-)
G202944 NA other downstream 803822 3985342 ~ 3986402 (-)
G202733 NA other downstream 1656572 3132313 ~ 3133652 (-)
G203286 NA other upstream 78063 4874379 ~ 4876734 (-)
G203840 NA other upstream 1122192 5918508 ~ 5927344 (-)
G203881 NA other upstream 1246937 6043253 ~ 6043789 (-)

Expression


Co-expression Network