CI01000047_05315990_05318854


Basic Information

Item Value
gene id CI01000047_05315990_05318854
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 5315584 ~ 5320411 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000047_05315990_05318854.mRNA
CTATATAGAGCTCTTCAGTGCTTGTATTTAATGCAGAACTTTGCTTTTAGTGAATTTCTGATATACTTTCACCTGTGGTTGTGACATTGGCATTTCCTTCATATTAAATTTTAGAGATGAGAGGCTTTTGACTTCAGTTGACGGAAACTATTTCCTGGATTCCCTGAAAGAGCTGTTATTGATTTCTTTGCCAAAGCAAGGTGACGTGAGTGTCTTCAGACAGACATAGCCTTTAAAGTGAATATTCACTATTGATGTGAATCTTTTGGAAGCTGTCCTGCAGACTCTGTTCATTCATTCATTCAAGTGAATGCAAGATTTGCAGTGTTTATAATAAATATATATATGAATATTATCTTCATATCTGATGTTGTTGACCCACATTGACAGGAAAAACGCATAGATAATGGAGATAATGGGAAAGCAGGAGATTGTGCATAAAAAGGGTGTCGGGACGGACCCTCATATGGCTCTGGCTCTGCAACCTGATTCCAAACTGGCCAAAGAGAAGAAGAAGAGCTCTATGGCTGGCCTGTATGAGGAGGACGAGGAGGAGCTGTCCATCAGGATAGGTAGAGCAGGAGTTCACTCAGGCAAGCTCTTCTTCACAATCCCACAGTCTGCTCTCTCACTAAACCTCCTCACTGGAGGCAAAAGCACAGCAGTAGATGTGTGTCAGCTGTATTGATGGCTCTCTCTGGGTTCCCTGTTGGCTTTCCTTCCACTTCTGAATCACATTCCTGTGTCTTTTTGTTATGAACAAGCTCACTTTTTTAGGTTTCTCTCTGGGTTTCATAATTGCAGCTCTTAAGTCTCTTTAGTGTGCACTATGGAGTGTTGGTGGTGGGTTAAACTGCTTGGCCATGAATAGATCACAGAAGGATTATACAGTTCTCTCAAGTGGTGCTTAATGCAATACTTATAAAAATATATCAATGTAACTTTTGCAATTTACCGTCATGGAAAGGCGGATCAGACATATGCAGAGTTCAAGAGGGCTTTAGGTGATATTCATGGAAATGATAAAGACAGTAAGAAAGAAATATATATACACCAATCAGGCATGACATTCTGAGCACTGACAGGTGAAGTGAATAACACTGATCATCTCTTCATCACGGCACCTGTTAGTGGGTGGATATATTAGGCAGCAAGTGAACATTTTGTCCTCAAAGTTGATGTGTTAGAAGCAGGAAAAATGGACAAGTGTAAGGATTTGAGCGAGTTTGACAAGAGCCAAATTGTGATGGCTAGACGACTGGGTCAGAGCATCTCCAAAACTGCAGCTCTTGTGGGGTGTTCCCGGTCTGCAGTGGTCAGTATCTATCAAAAGTGGTCCAAGGAAGGAACAGTGGTGAACCGGCGACAGGGTCATGGGCGGCCAAGACTCAGCGAAGGCTGACCCGTGTGGTCCGATCCAACAGACGAGCTACTGTAGCTCAAATTGCTCAAGAAGTTAATGCTGGTTCTGATAGAAAGGTGTCAGAATACACAGTGCATCAGTTTGTTGTGTATGGGGCTGCATAGACACAGACCAGTTTGGTGACCCCTGTCCACCACCGAAAGCGCCAACAGTGGGCACGTGAGCATCAGAACTGGACTACGGAGCAATGGAAGAAGGTGGCCTGGTCTGATGAATCACGTTTTCTTTTACATCACGTGGATGGCTGGGTGCGTGTGCGTCGCTTACCTGGGGAACACATGGCACCAGGATGCACTATGGGAAGAAGGCAGTGTGATGCTTTGGGCAATGTTCTGCTGGGAAACCTTGGGTCCTGCCATCCATGTGGATGTTCTTTGACACGTACCACCTACCTAAGCATTGTTGCAGACCATGTACACCCATTCATGGAAACGGTATTCCCTGGTGTCTGTGGCCTCTTTCAGCAGGATAATGCTCCTGCCACAAAGCAAAAATGGTTCAGGAATGGTTTGAGGAGCACAACAACGAGTTTGAGGTGTTGACTTGGCCTCCAAATTCCCCAGATCTCAATCCAATCGAGCATCTGTGGGATGTGCTGAACAAACAAGTCCGATCCATGGAGGCTCCACCTCGCAACTTACAGGACTTAAAGGATCTGCTGCTGACATCTTGGTGTCAGATACCACAGCACACCTTCAGGGGTCTAGTGGAGTCCATGCCTCGACGGGTCAGGGCTGTTTTGACAGCAAAACGGGGACCAATACAGTATTAGGAAGGTGGTCATAATGTTATGCCTGATCGGTGTATATTAAAATGAAAGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000047_05315990_05318854.mRNA True 2245 mRNA 0.45 2 5315584 5320411

Neighbor

gene id symbol gene type direction distance location
CI01000047_05267807_05269108 NA coding upstream 46434 5267807 ~ 5269150 (+)
CI01000047_05185698_05212150 USP22 coding upstream 103360 5185698 ~ 5212224 (+)
CI01000047_05159134_05162486 NA coding upstream 152989 5157205 ~ 5162595 (+)
CI01000047_05104311_05105437 RASD1 coding upstream 209687 5104201 ~ 5105897 (+)
CI01000047_05080583_05091592 NA coding upstream 223619 5079334 ~ 5091965 (+)
CI01000047_05339574_05340802 NA coding downstream 17274 5337685 ~ 5340872 (+)
CI01000047_05380032_05387598 SLC39A11 coding downstream 58954 5379365 ~ 5388252 (+)
CI01000047_05438344_05441756 NA coding downstream 115130 5435541 ~ 5442287 (+)
CI01000047_05468225_05478050 NA coding downstream 146678 5467089 ~ 5479506 (+)
CI01000047_05856549_05859800 NA coding downstream 535704 5856115 ~ 5859942 (+)
G201869 NA non-coding upstream 195940 5119350 ~ 5119644 (+)
G201863 NA non-coding upstream 205382 5109988 ~ 5110202 (+)
G201848 NA non-coding upstream 206409 5108524 ~ 5109175 (+)
G201847 NA non-coding upstream 217603 5097585 ~ 5097981 (+)
G201856 NA non-coding upstream 242427 5072687 ~ 5073157 (+)
G201959 NA non-coding downstream 205391 5525802 ~ 5625106 (+)
G202021 NA non-coding downstream 311804 5632215 ~ 5632418 (+)
G202030 NA non-coding downstream 329955 5650366 ~ 5650573 (+)
G202033 NA non-coding downstream 334337 5654748 ~ 5655020 (+)
G201599 NA other upstream 833127 4415813 ~ 4482457 (+)
G201387 NA other upstream 1613724 3696516 ~ 3701860 (+)
G201186 NA other upstream 2227397 3018705 ~ 3088187 (+)
G200076 NA other upstream 2737587 2520596 ~ 2577997 (+)
G200003 NA other upstream 2996622 2316863 ~ 2318962 (+)
G202382 NA other downstream 1495306 6815717 ~ 6816118 (+)

Expression


Co-expression Network