CI01000047_05805272_05807974


Basic Information

Item Value
gene id CI01000047_05805272_05807974
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 5805272 ~ 5807974 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000047_05805272_05807974.mRNA
ATACTCAAACACAGTGTACAGACTACGTTGTGCAGGCCTTTACAGTGCTTCGACTTCGGCGTCTAGTCACGGTGTCCAGATCTGCAGAAACAGAAAAACAGTGTATAGACTTTTCACAAATCTCCAGATTTGTGACTTCTCCACCGGGCATCATGTCCACATCATCATCTTCATCTCCATCTTTGTCCCTCTCTGTGGACAGTGTACAGAGGCGGTTATGTAATGAGTTGTTAAGTATTAGCAGCAAAGCCTCGTGCAATATGGAGTGGAGATGGAGTGGCTATAGATCGGATGGACAAAGCGAACAGGTCGGTTGTGGCAAGTGCTGTTTGTCCTTGTCCAACAGCCTCCAAGGGATTTTTTGCCCTCCACTGCCATGTCAAGTTCCTGTCGAGCCAGCAGAGACTTCAAATGGCCTGACTGCTTACGGTGCCTTGGAGGCTTCTTCTGTGATCAACAGCTCTACAGAAAAACCTACACAACACAGGACGAAGAAAAGATTTTGCTCTTTCTTGAAGAGGATATGGAAGTTTATAAAGCGTCCTTTCTGCGGCTGTTCCTGCAGTAGTGCTGTGGATGTTGTGGAGCCATTTGTCCCTCCGCCAGATCTGGACGCAGAGCCTAATCCTGTGCCAGATCACATAGGCGTCAAGCCAAATAAAGAGTCCTTTGAGTCTCTCTATGACGTGGTAAAGTTGATCGGATCCGGAGGATTTGGCATGGTGTATGAGGGGAAACGCAAATTTGATGGCAAAAAGGTTGCCATCAAGCGGATGCGCAAGATTGACAACAATCGCTATCTTGTTATTCCCGGGCATCCCAAACCTCTCGTTACTGAAGTGGCGCTGCTGCTAATGATGAGGAAAGGACCCAGAAGCCCTTACGTCATAGAGCTATACGATTGGTTTGAACACCCTCGCAAATTCACTCTCATTATGGAGTACCCTGAACCCTGCGAGAGCTTGCTGGACTTCCTCATCCGTAATCCTAAACTGGATGAGAAGACAGCACGGAGCATCATGCGACAGGCTGTGCTGGCTGTACAACACTGCATCGAGCATGACGTCTTTCATAATGATGTTCATCCGCAGAATTTCTTGTTGAAGACAGACACGTCCGAGCTCAAGCTGATAGACTTCGGCAGCGGTCAGCTACTTAGTAGCGACGGCTACGAGAGCGACACGTACATTGGATTACTGGATTACTGCCCACCTGAAATCTACACACAACCTCGATTCCACGCCATCCCAACAAACGTGTGGGCTCTAGGAGTGTTGTTGTATGAGATGATGAACGCATGTGTACCTTTTCGCAATTCAAGGGAAATCACACAAGCGAAATTTAGGTTTCAGAACTCCAACTTATCCAAAG

Function

NR:

description
Pim1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000047_05805272_05807974.mRNA True 1371 mRNA 0.48 6 5805272 5807974

Neighbor

gene id symbol gene type direction distance location
CI01000047_05546059_05547988 SOX9A coding downstream 256916 5544781 ~ 5548356 (-)
CI01000047_05247473_05248489 SSTR5 coding downstream 556591 5246963 ~ 5248681 (-)
CI01000047_05235089_05236228 SSTR2A coding downstream 568999 5234144 ~ 5236273 (-)
CI01000047_05219313_05222967 NA coding downstream 582282 5219190 ~ 5222990 (-)
CI01000047_05151314_05157285 NT5M coding downstream 646878 5149719 ~ 5158394 (-)
CI01000047_05862382_05868129 NA coding upstream 53851 5861825 ~ 5868679 (-)
CI01000047_05869347_05869519 NA coding upstream 61310 5869284 ~ 5869519 (-)
CI01000047_05958264_05971163 MAPK8B, MAPK8, MAPK8A coding upstream 149917 5957891 ~ 5971163 (-)
CI01000047_06139714_06142702 UBTD1, UBTD1A, UBTD1B coding upstream 331643 6139617 ~ 6142702 (-)
CI01000047_06184569_06194319 ZDHHC16 coding upstream 376098 6184072 ~ 6195664 (-)
G203764 NA non-coding downstream 1114 5803136 ~ 5804158 (-)
G203720 NA non-coding downstream 151184 5653017 ~ 5654088 (-)
G203719 NA non-coding downstream 152314 5652745 ~ 5652958 (-)
G203713 NA non-coding downstream 160735 5644335 ~ 5644537 (-)
G203712 NA non-coding downstream 162305 5642745 ~ 5642967 (-)
G203853 NA non-coding upstream 167936 5975910 ~ 5976256 (-)
G203857 NA non-coding upstream 172826 5980800 ~ 5981561 (-)
G203858 NA non-coding upstream 174770 5982744 ~ 5983064 (-)
G203859 NA non-coding upstream 176607 5984581 ~ 5984887 (-)
G203861 NA non-coding upstream 183803 5991777 ~ 5992089 (-)
G203286 NA other downstream 928538 4874379 ~ 4876734 (-)
CI01000047_04575184_04576337 GNGT2B, GNGT2 other downstream 1228307 4574335 ~ 4576342 (-)
CI01000047_04285605_04286644 COA3A other downstream 1518591 4285227 ~ 4286694 (-)
CI01000047_04213574_04213976 NA other downstream 1590842 4213409 ~ 4214085 (-)
G202944 NA other downstream 1818870 3985342 ~ 3986402 (-)
G203840 NA other upstream 110534 5918508 ~ 5927344 (-)
G203881 NA other upstream 235279 6043253 ~ 6043789 (-)

Expression


Co-expression Network