CI01000047_05856549_05859800


Basic Information

Item Value
gene id CI01000047_05856549_05859800
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 5856115 ~ 5859942 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000047_05856549_05859800.mRNA
CTATAAAATACGGCCTTAAACACATAAAAAATGTATTCATGCAATTTGTCAAACAAAAGTGAAGACGCCATAAGCAAAAATTGTCTATAAAACTGCAAAAAGCAATGCTTTCTTTAAAAAAGTGAATGCACTTTTTATTTTTAGGAAAGGCTAGGTTGGTGTAAGAGAAAAGGAAATTCAAAGGTGGCCTTAACGGTGTATGTATCTGATTAATTAATATGAGGCAGACAGTTTATTTAACTTTAGTCATGATGTTTGACCTGTAAGGCTGTCTGTTCACTCTTATCTGTGCGGGGTGAGCAGCATACAAACCCTTGTGTAAACTAAGGTGTAAATTTATAGTTGGTTTGAATGCACTGTCACACCAGTCCATCTCAGCTGCATCACAGCAGCAGGTGCAAATTCACACTATAAGGGAATACTCTGGTTGTAACATGGTCAAATTAAGATCTGCACGGTCAGAGATGAAGTTACTGACCATTTATCTCTTTGGGATTTTTGCTTTTGTGTCATCCTCCACCTCAACAGATGTGCAAAAGATAACAAATGCAATTAAGATGCGCAACTGGAATGAAATATTCCAGGTAAAAGATTTGACGCGCAATGTTCCGACCAATAGGAAGGCACCTGAGTTCATGATGGAGTTATATGATGCCGTTGCGGACTCGAACGGAACGCTGAAAAACTCGAAAGTGCTGGAAGGAAATATTGTTAGGAGTTTCGAAGGACAGTCCAGTGGCTCATATCACTTCTTTAATCTGACATCATTCGGACAGGACGAGCGCGTGGTCAAAGCAGAATTCCGATGGTTTCACCAGAAACAGCCTTTTATGGGACGTCATCGCTTTTACAAAGTCGAGCTGTATGAAGTGCTGGACAGCAGACCTAAACCTTGGCAAAGAAATTTGATATGCGCACCTGTCTACACTAGAGGATGGGAGGTATTCAACATCACACAAATGGTGACCAGATGGATTCTTCACAGCGGTACAAATAATGGTATCCTGGTCGTGATTGCTTCACCTTCAGGTAACTGGTTTAAGTCCAGCATTCAGATGAACGGGCAGTCCGATGAGACAAATGCATATTTGGTTATATATTCAGATGATGGACGAAAGCGCTACCAACACCCACCTTTCTACACAGGACAAAATATCAACACATCCCTTAAATTCCTCGAGCCTACAGAAAGTTTAGTGAAGTCAACAATGCGGAACCGCAGGAGCGTGCGCACATTAACTTCTACATGCCAGAGAACAAACCTCTATGTAGACTTCACTAAAATTGGGTGGTCAGGGTGGATAATATCTCCCAGAGGTTATAACGCATACAGTTGCATGGGCTCGTGTCCGTTCCCGCTGGGCGAAGGTCTACGGGCTACGAATCACGCTACCGTAAGATCCATCATGAACGCGCTGAAACTATCGCAGGAGGCGGGAAAACCGTGCTGCGTACCTGATGTGCTTCACCCCATCAGCCTCCTGTACTTCGACGATGAGGAAAATGTTGTTCTAAAACAGTACAACGACATGGTTGCGGGCAGTTGTGGCTGCCATTAAAATACAAAACGGCAAGATGTAAACTTATCTGTTGATGTGTACGGTTTGAAGCATTACATGTGCCACACTTCAATCAAATGTAAATTTAGATAGCACTAATATAAGTTGTTATTTGTATGGGTATTTGTAAGTCTAAACCAAA

Function

NR:

description
anti-dorsalizing morphogenetic protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000047_05856549_05859800.mRNA True 1701 mRNA 0.42 5 5856115 5859942

Neighbor

gene id symbol gene type direction distance location
CI01000047_05468225_05478050 NA coding upstream 377495 5467089 ~ 5479506 (+)
CI01000047_05438344_05441756 NA coding upstream 413828 5435541 ~ 5442287 (+)
CI01000047_05380032_05387598 SLC39A11 coding upstream 467863 5379365 ~ 5388252 (+)
CI01000047_05339574_05340802 NA coding upstream 515243 5337685 ~ 5340872 (+)
CI01000047_05315990_05318854 NA coding upstream 535704 5315584 ~ 5320411 (+)
CI01000047_05887388_05899310 VSTM4B coding downstream 26280 5886222 ~ 5899612 (+)
CI01000047_05911739_05912506 LRRC18B, LRRC18 coding downstream 51697 5911639 ~ 5914944 (+)
CI01000047_05927095_05951348 ARHGAP22 coding downstream 67153 5927095 ~ 5951356 (+)
CI01000047_05983785_06007139 FRMPD2 coding downstream 123843 5983785 ~ 6007342 (+)
CI01000047_06045320_06049402 NA coding downstream 184760 6044702 ~ 6049687 (+)
G202033 NA non-coding upstream 201095 5654748 ~ 5655020 (+)
G202030 NA non-coding upstream 205542 5650366 ~ 5650573 (+)
G202021 NA non-coding upstream 223697 5632215 ~ 5632418 (+)
G201959 NA non-coding upstream 231009 5525802 ~ 5625106 (+)
G202111 NA non-coding downstream 1945 5861887 ~ 5869731 (+)
G202113 NA non-coding downstream 19882 5879824 ~ 5882797 (+)
G202063 NA non-coding downstream 95297 5955239 ~ 5958404 (+)
G202125 NA non-coding downstream 116044 5975986 ~ 5976266 (+)
G202126 NA non-coding downstream 116712 5976654 ~ 5977045 (+)
G201599 NA other upstream 1373658 4415813 ~ 4482457 (+)
G201387 NA other upstream 2154255 3696516 ~ 3701860 (+)
G201186 NA other upstream 2767928 3018705 ~ 3088187 (+)
G200076 NA other upstream 3278118 2520596 ~ 2577997 (+)
G200003 NA other upstream 3537153 2316863 ~ 2318962 (+)
G202382 NA other downstream 955775 6815717 ~ 6816118 (+)

Expression


Co-expression Network