CI01000047_06302441_06309359 (DCXR)


Basic Information

Item Value
gene id CI01000047_06302441_06309359
gene name DCXR
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 6302441 ~ 6309359 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000047_06302441_06309359.mRNA
ATGGAGATAACATTTAGTGGAAAGCGTGCTTTGGTGACTGGAGCTGGCAAAGGGATCGGACGGGCCACGGCACTGGCTCTGGCACGCTGTGGGTCAGAGGTCACGGCTGTCACACGCACTAAGGCTGACCTGGATAGCCTAGTGCAGGAGTGTCCCTCCATTAAGCCGGTGTGCGTGGACCTGTCGGACTGGGATGCCACAGACCAGGCGCTGAAAGACATCGGTCCAGTGGATCTTCTGGTGAACAATGCAGCCTGTGCTAAACTTCAGCCCTTCCTAGAAGTCACGCCAGATCAGTTTGACATGTCTTTCAATGTCAACGTGAAAGCTGCACTTCACGTTGCTCAAATAGTGGCACGAGGAATGAAGGTCAGAGGAACTGGAGGATCCATTGTGAACATCTCGAGTCAAGCCTCACAATGTGCCCTGAAAGATCATGCCGTATACTGCGCCACAAAAGGAGCGCTGGACATGCTGACCAGAGTGATGGCGCTGGAGTTGGGGCCGTATCAGATAAGAGTGAACTCAGTGAACCCGACCGTGGTGATGACAGAGATGGGTAAGATCGGCTGGAGTGACCCAGAAAAGGCCAAGAGCATGACATCACGTATCCCACTGGGTAAATTTGCAGAAGTGGAGGATGTGGTCAACTCCATCCTCTTCCTCCTCAGCGATAAGAGTGCCATGACCAATGGAGTGATCCTGCCCGTGGATGGAGGGTTTCTGGCTTGCTAA

Function

symbol description
dcxr Predicted to enable L-xylulose reductase (NADP+) activity and carbonyl reductase (NADPH) activity. Predicted to be involved in glucose metabolic process and xylulose metabolic process. Human ortholog(s) of this gene implicated in pentosuria. Orthologous to human DCXR (dicarbonyl and L-xylulose reductase).

GO:

id name namespace
GO:0005575 cellular_component cellular_component

KEGG:

id description
K03331 DCXR; L-xylulose reductase

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000047_06302441_06309359.mRNA True 735 mRNA 0.53 8 6302441 6309359

Neighbor

gene id symbol gene type direction distance location
CI01000047_06242992_06270894 NA coding downstream 29650 6242727 ~ 6272791 (-)
CI01000047_06216778_06234561 FAM20A coding downstream 67169 6215626 ~ 6235272 (-)
CI01000047_06184569_06194319 ZDHHC16 coding downstream 106777 6184072 ~ 6195664 (-)
CI01000047_06139714_06142702 UBTD1, UBTD1A, UBTD1B coding downstream 159739 6139617 ~ 6142702 (-)
CI01000047_05958264_05971163 MAPK8B, MAPK8, MAPK8A coding downstream 331278 5957891 ~ 5971163 (-)
CI01000047_06312165_06320684 NA coding upstream 1809 6311168 ~ 6321500 (-)
CI01000047_06327240_06328630 PTS coding upstream 17412 6326771 ~ 6328630 (-)
CI01000047_06337531_06343900 GLP2R coding upstream 27734 6337093 ~ 6344014 (-)
CI01000047_06436919_06455480 HS3ST3A1 coding upstream 126988 6436347 ~ 6455817 (-)
CI01000047_06487774_06496807 DHRS7CB, DHRS7C coding upstream 178356 6487715 ~ 6496807 (-)
G203855 NA non-coding downstream 165342 6134717 ~ 6137099 (-)
G203888 NA non-coding downstream 240489 6061530 ~ 6061952 (-)
G203884 NA non-coding downstream 245970 6055469 ~ 6056471 (-)
G203878 NA non-coding downstream 267121 6035036 ~ 6035320 (-)
G203876 NA non-coding downstream 272536 6029589 ~ 6029905 (-)
G204005 NA non-coding upstream 35875 6345234 ~ 6345473 (-)
G204010 NA non-coding upstream 57016 6366375 ~ 6366652 (-)
G204012 NA non-coding upstream 65260 6374619 ~ 6414242 (-)
G204031 NA non-coding upstream 155081 6464440 ~ 6466219 (-)
G203942 NA non-coding upstream 230666 6540025 ~ 6546064 (-)
G203881 NA other downstream 258652 6043253 ~ 6043789 (-)
G203840 NA other downstream 375097 5918508 ~ 5927344 (-)
G203286 NA other downstream 1425707 4874379 ~ 4876734 (-)
CI01000047_04575184_04576337 GNGT2B, GNGT2 other downstream 1725476 4574335 ~ 4576342 (-)
CI01000047_04285605_04286644 COA3A other downstream 2015760 4285227 ~ 4286694 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location