CI01000047_06327240_06328630 (PTS)


Basic Information

Item Value
gene id CI01000047_06327240_06328630
gene name PTS
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 6326771 ~ 6328630 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000047_06327240_06328630.mRNA
ATGTCCGAGCGCATCGCCTACATCACACGAGTGCAGAGCTTCAGCGCCTGCCATCGATTACACAGCAAATCTTTAAGTGATGAGGAGAACAAACAAATATTTGGAAAGTGCAACAATCCTAATGGCCATGGTCATAATTATAAAGTTGAAGTGACGGTTCGAGGAAAGATCGACAGGAACACAGGGATGGTTATGAATCTTACTGACCTAAAGGACTATATTGAGGAGGCCATCATGAAACCTCTTGACCATAAAAATCTGGACCGGGATGTCCCTTACTTTTCTGATGTTGTCAGCACCACAGAAAACCTGTGCGTCTTTATTTGGGACGGCATGGCGAAGCTTCTCCCGCCGGACAGCCTGTATGAGATCAAAGTGCATGAAACGGACAAGAATATTGTTGTATACAGAGGCGAATAGACTAATTGATCTCAGTGCAGGAGAAAAGCTTTCGTGGCTTTAGAAAGTGTATTAGGTGAGAGCGGCACCTGCTGCGCTTCATTCAGAACATGGACAACAATATGGGATTAATGTAAGTCACTGAGACTGAGGCTCATCTGGGAGATTGATCCTATTAAACACAGAGAGATTACACTCACACACACACACACACACACACACACACTCACAATCTTTTCCCAAACTAATTAAGTCTCAGCAACTCTTCTTTTACGTTTCTCAAAGCCTTTTTTAACAAAAGAAGGCTTGTTTGTATTTTCAAAATATTTGTACTAATGAATAATGAAAATGTTTTGATCATATTCATTTTTAGTACTTAAATCTGTTGTTGGCATTTTAATGTTTTTAAAAATGCTTTTGCTGAGAAAATGTTTTTATTTATACTACCAATAGATGGTGCTGCAAGTGTATCAGATTGCATTCCAATAAA

Function

symbol description
pts Predicted to enable 6-pyruvoyltetrahydropterin synthase activity and metal ion binding activity. Predicted to act upstream of or within tetrahydrobiopterin biosynthetic process. Human ortholog(s) of this gene implicated in BH4-deficient hyperphenylalaninemia A and phenylketonuria. Orthologous to human PTS (6-pyruvoyltetrahydropterin synthase).

NR:

description
6-pyruvoyl tetrahydropterin synthase, partial

GO:

id name namespace
GO:0006729 tetrahydrobiopterin biosynthetic process biological_process

KEGG:

id description
K01737 queD, ptpS, PTS; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000047_06327240_06328630.mRNA True 889 mRNA 0.39 6 6326771 6328630

Neighbor

gene id symbol gene type direction distance location
CI01000047_06312165_06320684 NA coding downstream 5271 6311168 ~ 6321500 (-)
CI01000047_06302441_06309359 DCXR coding downstream 17412 6302441 ~ 6309359 (-)
CI01000047_06242992_06270894 NA coding downstream 53980 6242727 ~ 6272791 (-)
CI01000047_06216778_06234561 FAM20A coding downstream 91499 6215626 ~ 6235272 (-)
CI01000047_06184569_06194319 ZDHHC16 coding downstream 131107 6184072 ~ 6195664 (-)
CI01000047_06337531_06343900 GLP2R coding upstream 8463 6337093 ~ 6344014 (-)
CI01000047_06436919_06455480 HS3ST3A1 coding upstream 107717 6436347 ~ 6455817 (-)
CI01000047_06487774_06496807 DHRS7CB, DHRS7C coding upstream 159085 6487715 ~ 6496807 (-)
CI01000047_06574147_06577660 BSK146 coding upstream 245418 6574048 ~ 6577979 (-)
CI01000047_06587350_06593162 NA coding upstream 258460 6587090 ~ 6593162 (-)
G203855 NA non-coding downstream 189672 6134717 ~ 6137099 (-)
G203888 NA non-coding downstream 264819 6061530 ~ 6061952 (-)
G203884 NA non-coding downstream 270300 6055469 ~ 6056471 (-)
G203878 NA non-coding downstream 291451 6035036 ~ 6035320 (-)
G203876 NA non-coding downstream 296866 6029589 ~ 6029905 (-)
G204005 NA non-coding upstream 16604 6345234 ~ 6345473 (-)
G204010 NA non-coding upstream 37745 6366375 ~ 6366652 (-)
G204012 NA non-coding upstream 45989 6374619 ~ 6414242 (-)
G204031 NA non-coding upstream 135810 6464440 ~ 6466219 (-)
G203942 NA non-coding upstream 211395 6540025 ~ 6546064 (-)
G203881 NA other downstream 282982 6043253 ~ 6043789 (-)
G203840 NA other downstream 399427 5918508 ~ 5927344 (-)
G203286 NA other downstream 1450037 4874379 ~ 4876734 (-)
CI01000047_04575184_04576337 GNGT2B, GNGT2 other downstream 1749806 4574335 ~ 4576342 (-)
CI01000047_04285605_04286644 COA3A other downstream 2040090 4285227 ~ 4286694 (-)

Expression


Co-expression Network