CI01000047_06587350_06593162


Basic Information

Item Value
gene id CI01000047_06587350_06593162
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 6587090 ~ 6593162 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000047_06587350_06593162.mRNA
GAGAAGCCGATTTTTGAGAGCGAGGATATTATATGTCTCCTGAAAGACCAAAAAGAGCTGTACATCCACAAAGACCATCTCTCGGCCAGACTGGACATCGGCAGAGAGCTGGTGAAGTTGTTCACCGCAGAAAAGACCTTTGCGAAAGAGCTGGAGCGGTTTCTCCAGGGCCTTGTTACGTGCATTAACGACCGAGCTGCTTTAAAGAGGTTTCTGGACAGGGAGAACGCTCAAGAACTCCCTGCAAATGAGGAACCATGGGACGTCCCAGCGCCACAGCCGGTGGAAGTAAAAACAGAAACCATCGTCCGTCCATCAGGAGTCGTGCAGGAGGACCAAATGCAGATGGATCAGAATAAAGAGGACCGGCTGGTTTGCTGGCCGCCTAAAGCCTCGCTGAATAAAACAGGTGGCAGCAGTTCAGGTTCAAGCAGCCAAGCTTTGGAGGAGGTGATGAAGATGTGGCCTCCTCCTGCTCCTCTGGGTCCAGTGACGCTTCCAGCTCAATCAGGAGTCGAGAGGAGCTCGTCCAGCACCAGTGTCCATCAGCGAACCGCAGATCCTCCAGGGCATGTAGATGCAAGACCTCAACATGAACAGGCTCCCAAAGCAAGCAGTGCCGTCCCACGATCCTCAGAGCGAAGGGAAGAGGCCGCGGTGCAGGATGTCAGTCCTCAGCAGCCTGTGAAGCCGAACGCTGCTCCGGATGAACAAGATGAACCTACAGCGGATGAAAGCAGCGCAGCGTCTTCAGCAGCAGATCAACAAAGCCTTAATTCAACCCAGGCGCCTGAGAAGGTGTTGAGCCAGTTTCAGGGAGCTGAATGCCGACCACGTCCGCCCATAACGCTGGATAATGCGGTGTGGAGCAAAGCCATGAGTCCGGAGGACGTCCTGGAGGATCTTCAGCTGGATTGCTCCGTGCCTCAAACCCTGGTGCTCCCCAAAGACCAAGAAGACACGGCCTGTATTGGCCAATGGGGAGAGCAGCTGGTGTTCTCCTTCCTCACTCACTGGAAAGAGAACGGCGGTAGCTCTGGGCCCAGCGAAATCACCTGGTTCAACGAGAAAGGGGAGAGCGGCCGCGCGTGCGACTTCAAGCTGACCTTCACCGCAAATGGAGGCACGCGAGAGATCTTCGTGGAGGTGAAGACGACTGTCAGGCGAGATCGACACTTCATCCACATGTCTGCGAACGAGCTGGATTTGGCACTGAAGGAAAAAGAGCGATATCACATATATCGAGTGTACGGCGCTGGCGACGTGCAGCACGTCCGTCTCTGTCGCATCAAGAATCTCGCCCAGCATCTGCATTCGAAGTCTCTGGAGTTGTTTTTATTTGTGTAGCCGTCTTTAGAATAACATGTCTGATCAATGTTAAATGCACAATTTTGCCCGGTTTGTATTCAGTTGTTCATCGATGACGTGTTTTTAACTACTGTTTGTACTGATACATAATATTGCACAATTTTAATGGCCAGTTCCTTTTAAAGAATCGTTTCCTGTTTAATTGTTTGGTCGTGTATTACAAGAACATAGTTTATAAACTCTACTTTTAAAAGTGTAACTTCACTGTTTGGATTGCTATGATCAATTCAGTAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000047_06587350_06593162.mRNA True 1607 mRNA 0.51 7 6587090 6593162

Neighbor

gene id symbol gene type direction distance location
CI01000047_06574147_06577660 BSK146 coding downstream 9111 6574048 ~ 6577979 (-)
CI01000047_06487774_06496807 DHRS7CB, DHRS7C coding downstream 90283 6487715 ~ 6496807 (-)
CI01000047_06436919_06455480 HS3ST3A1 coding downstream 131273 6436347 ~ 6455817 (-)
CI01000047_06337531_06343900 GLP2R coding downstream 243076 6337093 ~ 6344014 (-)
CI01000047_06327240_06328630 PTS coding downstream 258460 6326771 ~ 6328630 (-)
CI01000047_06644025_06659494 SULT2ST1, SULT2ST2 coding upstream 50588 6643750 ~ 6659694 (-)
CI01000047_06660338_06666635 SULT2ST1, SULT2ST2 coding upstream 67138 6660300 ~ 6666635 (-)
CI01000047_06667661_06692521 NA coding upstream 74058 6667220 ~ 6692521 (-)
CI01000047_06843638_06844618 TOB1A, TOB1, TOB1B coding upstream 250208 6843370 ~ 6844618 (-)
CI01000047_06900704_06954882 SPAG9 coding upstream 307542 6900704 ~ 6954882 (-)
G203946 NA non-coding downstream 13509 6568997 ~ 6573581 (-)
G203963 NA non-coding downstream 34919 6550190 ~ 6552171 (-)
G203942 NA non-coding downstream 41026 6540025 ~ 6546064 (-)
G204031 NA non-coding downstream 120871 6464440 ~ 6466219 (-)
G204012 NA non-coding downstream 172848 6374619 ~ 6414242 (-)
G203924 NA non-coding upstream 113507 6706669 ~ 6751591 (-)
G204069 NA non-coding upstream 114946 6708108 ~ 6708823 (-)
G203919 NA non-coding upstream 155006 6748168 ~ 6773497 (-)
G203930 NA non-coding upstream 160627 6753789 ~ 6756733 (-)
G204095 NA non-coding upstream 256540 6849702 ~ 6850132 (-)
G203881 NA other downstream 543301 6043253 ~ 6043789 (-)
G203840 NA other downstream 659746 5918508 ~ 5927344 (-)
G203286 NA other downstream 1710356 4874379 ~ 4876734 (-)
CI01000047_04575184_04576337 GNGT2B, GNGT2 other downstream 2010125 4574335 ~ 4576342 (-)
CI01000047_04285605_04286644 COA3A other downstream 2300409 4285227 ~ 4286694 (-)

Expression


Co-expression Network