CI01000047_06667661_06692521


Basic Information

Item Value
gene id CI01000047_06667661_06692521
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 6667220 ~ 6692521 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000047_06667661_06692521.mRNA
GTCAAGCTCATCCAGCGGCACGGCCAGATCGACAGAGAGCGTCGGCGTCCGGCAGCCGGCGAAGAGCAAGATCCGGCGGCACCAGCACCGTCTGTCGGCTGTGTTCGGCCGCGGGCCTCGGCGAGCTTCAGCGGAGATGACCGCCGCAGGAGAGGAGGAGATGGCGGTGACGGATGATCCATCCGAGCTGTCCAATCATGTCACGGCTCCAGGCATTCTGAAGATTTTTGGCACTGAGATTTGCGAAGGAGCAAATTACAAGAGCGTACTGGCCACGACACACTCCAGTGCCAAAGAGCTGGTTAAAGAGGCACTCGCCAGATACTCCCTGAGCAAAGCAGAGGCTGATGACTATGTGTTGTGTGATGTGATCGGCTGCATTGAAAACCAGTGCTGGAGGACGGAATGTGTTCGTGTGGTTGGAGACAATGAGAAGCCGCTCCTGCTGCAGTCGCTCTGGAAACCCAGAGAGGGCTTTGCTCGCCGGTTTGAGATCCAGCGCAAGGCCACAGTGGAGGAAAACAACTCTAAAGACAAAGACACGGTGACCGCCGGCATAAACGCACAGGCACGCAAGCTGCAGAAGACGCGCTCCAGGGGGAAATCTGTCCCGCTGGACATATGCATGAGTGATGGCAGACACAATCTGTTTAAGAGTCTCAGCGAGACGGACCTGCCAGCCGAGGCTCACAGCGCCTGTCCGGAGACCACGGAGGATCCAGAGGCAGAGGCCTACAAAGCAACGCCGTGTCCTGCCAGTGAACGCGAGGAGACGGAGAGTAGCGATGACAACGCCACACAGTATTCCATTCATCCGCCCCTGGATTTCCCCTACTTCCTGCTCCTGCAGGGCTTCAGTTACAGACAGGATTTTGTCATCTATGCACTGATCAACAGCTGCACAGTATTCGGACGCCGTGATGAGCGAACTGAGCCCGAGAGCGATGCAGAAAGCCAGTATCTCTGGGCTCCAGATCTGCTGCCGCGTCACTGCTGCGTCCGGCGCCTGGACATCTCTCCGGCCTCAGCGGGCGGCCGGTCCGGCAGCGTGAGCCTACTGAAACCCCTCAACAGAGCGAAAGTGAAGAGGAACGGAGCAGCCGTCACCCATGAAGTGGAGCTGCAGTCGGGAGACGTCGTCAGCCTGGGCGATCATTACCTCTTCATGTATAAAGACCCGACTTCTGCAGCCGCGCAGACGTACACACGGCCTCCTCTCTGTCAAACGTGTGTGCTGTCAGAGAAAACCAGAACCTGCTTCAGAGACCTGGAGGGAGCAGAACTGGTTCTGCCGTATGATGTTGAACATGAATCCCGGGTCCTGGAGGAGATCTTTACCACGGTTGACCAGGATAAGTCTGCACACAAACTGACCGCGGCGTTCCTGCTGTGCTTGTGTCTCCAGCAGTCCGCCAATCATTTCTCAATGCCCGCCCTCCGCAGACTGCTGCTGCAGACAGCCAATCAGCTTCAAATGCTCGTATGGGCACAGCTTACATTAAAAGCAGATTTTCCTCGCTTTTCTGACGCAAGCAGAAGTGATTCAGACTGGCTGATCCAGGGTCTGGAGCCGCTGGTCCTTTGGATGTCCAACTCCATCCAGATCCTTCACTTCATTCACCAGGAGCTTCCTCCGGTGCTGGAGCTGCGCCTGTCGTCTGTGCGCTCGGCCAGCGAGGAGGCCATGACAGTCCTGGAGGAGGTTCTTATGTTCACCTTCCAGCAGTGTGTCTATTATCTCACCAAGACGCTGTACCCGCTTCTCCCAGGCTTTCTGGACAGTAATCCGTTCTCAGAGAGCGGTCAGCTGCAGGTGCCGGAGGACGTCAGACGAGTGCTGGACATCTGCACACAAACTCTGCAGCTCCTCAGAGGCTTCCAGGTGCACCAGGAGATCCTGACGCAGCTCTTCGCCTACCTCTTCTTCTTCATCAACGCTCTGCTGTTCAATCTGCTGATGGAGAGAGGATCGGGCGGGACGTTTTACCACTGGTCCCGTGGGGTCCAGATCAGGGCTAATCTGGATCTGCTGATGGACTGGACTCATGGAGCTGGACTCGGGGATCTGGCTCACACGTACCTTCTCAAGCTCTCCTCAGCTGTCAATCTACTGGCCACGCCGAAGGAGAACCTCCTGCAGGTCGTTTCAATGATTTTATTCATGCAGAAAATATTATTTCTAAAAAAGGCATTAGAAATAATTAACAGGAAGTATTACTCATTAAAGGATAAAGCTCGTGAACACAAAGATTCTTTCATGATGTGCTGGAAGGCTCTGCGGATGGAGTTCCCGTCTCTGAACGCGGCTCAGCTGCATCACATGTTGAGAGAGTATCACCCCCGCCGCTCCTGCGCCGCCGTGTGGACGCCCTCCAGCGCCGAGGCCAGCGCCGCTCTCTCCACCGTCGATATCCTGGAGAGTTTCGATAAGCATCCGCCTCTCGTCCTTCCCACTGACGGCTTCGAGCTCGAGCTGAAGAGACCAATCAGAGAGAGCGATCTAATTCAGCAACTGCACCGTTTTCACAGGCTGATCAAGACGATCACACACCCAGAATCCTCAGAGCCGCCTCAACTCGTCTCTGCAGTGCCGATGGAGGCCAAGCTCACCAAGATGGAAGTTCACCCAAAAGCTCAGCTTGAGTTCAGCCACACGGAGCTGGTGTTTCCTCCCGCTGGAGCGAGCGATCTGGGCTCATGTGAAGCTCTTTTAACCAGAAAGCTGCAGAATCTGGAGCTTCAGAATAAAGATGCGACTCACATCAGCGCGGAGCGTCCGGCGCTCGATCCCTCGTGTTTACTGACTCCACCGAACACGCCGCAAAACCTGGAGCTGACGGATTCCGACACGGATTCAAACCATCAGACGTCCACATGCATCACCGCAGTCAGAGAGGAAGGTGAGCGTGAAGAGTGTGAGAATGGAGAAGAAGATGACGTGTTTGTGCTGGAGCTGCAGAGAGCAGCATGTGGACTGGGTCTGATGCTGGTGGACAGAGAGGAAACGCCATTTACCGTCAGTGGGATTTACATCAAATCAGTTCTTCCAGACTCTCCTGCTGCTTTATGCCAGAGGCTGAGAGTCGGCGATCGCATACTAGCAGTGAATGGACTCAGTCTGGCGGGAGTCGACTATCAGACTGGCCTGGAGCTCATTCAGATGTCAGGAGACAGACCTCGGCTACTGGTTTCCAGATCTCACTGCGCTACAAAAGAAGCGAGGACAAAAACTAAATAGAGTTTAAAGGGGACCTATTCTGTCCTTTTGTTTTTGTGCTCTACTAGACTGAATGTTGATTATTTTCCTCATATTCTCCATTGTTCAGCTCCTCTCTTCCCAGTCTGTCAGTAACGCTCTGTTTAGTTTCTGTCTCTATGAAGCCCCTCCTTCTGAAAAGCACAGTGTGCTCTGATTGGTCGGCTGGAGCAGTGTGTTGTGATTGGTGTTCACAGCTTCAACACACCCCAAACTAACTCAACCAGGCCCCGCCCCTTTAATTTTTTAAATGAGGAATATTGTGAAGAAAACTCAAGACTACAATGGAGGCGTTTCAGGAGTTCAGAACTTTGGAACATAAACAAGCAAAACAAAATGACAAAATTTTTTAACATCTGGTTTTATACATTTTTGCCATTTTATTGACATCTTAATTGTGTAATCTTGAATTTTGTTATTAAA

Function

NR:

description
Ras-associated forkhead-associated dilute domain protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000047_06667661_06692521.mRNA True 3679 mRNA 0.53 15 6667220 6692521

Neighbor

gene id symbol gene type direction distance location
CI01000047_06660338_06666635 SULT2ST1, SULT2ST2 coding downstream 585 6660300 ~ 6666635 (-)
CI01000047_06644025_06659494 SULT2ST1, SULT2ST2 coding downstream 7526 6643750 ~ 6659694 (-)
CI01000047_06587350_06593162 NA coding downstream 74058 6587090 ~ 6593162 (-)
CI01000047_06574147_06577660 BSK146 coding downstream 89241 6574048 ~ 6577979 (-)
CI01000047_06487774_06496807 DHRS7CB, DHRS7C coding downstream 170413 6487715 ~ 6496807 (-)
CI01000047_06843638_06844618 TOB1A, TOB1, TOB1B coding upstream 150849 6843370 ~ 6844618 (-)
CI01000047_06900704_06954882 SPAG9 coding upstream 208183 6900704 ~ 6954882 (-)
CI01000047_06958499_06967108 DAGLB coding upstream 265462 6957983 ~ 6967834 (-)
CI01000047_06968741_06972782 ERD2, KDELR2.L, ERD22, KDELR2, KDELR1, KDELR2A, KDELR2B coding upstream 275803 6968324 ~ 6972850 (-)
CI01000047_06978552_06982232 METTL9 coding upstream 285927 6978448 ~ 6982542 (-)
G203946 NA non-coding downstream 93639 6568997 ~ 6573581 (-)
G203963 NA non-coding downstream 115049 6550190 ~ 6552171 (-)
G203942 NA non-coding downstream 121156 6540025 ~ 6546064 (-)
G204031 NA non-coding downstream 201001 6464440 ~ 6466219 (-)
G204012 NA non-coding downstream 252978 6374619 ~ 6414242 (-)
G203924 NA non-coding upstream 14148 6706669 ~ 6751591 (-)
G204069 NA non-coding upstream 15587 6708108 ~ 6708823 (-)
G203919 NA non-coding upstream 55647 6748168 ~ 6773497 (-)
G203930 NA non-coding upstream 61268 6753789 ~ 6756733 (-)
G204095 NA non-coding upstream 157181 6849702 ~ 6850132 (-)
G203881 NA other downstream 623431 6043253 ~ 6043789 (-)
G203840 NA other downstream 739876 5918508 ~ 5927344 (-)
G203286 NA other downstream 1790486 4874379 ~ 4876734 (-)
CI01000047_04575184_04576337 GNGT2B, GNGT2 other downstream 2090255 4574335 ~ 4576342 (-)
CI01000047_04285605_04286644 COA3A other downstream 2380539 4285227 ~ 4286694 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_005050 si:ch211-176g6.2 coding NC_007123.7 CM002896.2 657704 ~ 684200 (-)
bowfin (Amia calva) AMCG00013087 NA coding CM030125.1 CM030125.1 20485023 ~ 20502341 (+)