CI01000047_07072890_07079236 (GAS7B, GAS7)


Basic Information

Item Value
gene id CI01000047_07072890_07079236
gene name GAS7B, GAS7
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 7072545 ~ 7079236 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000047_07072890_07079236.mRNA
GCGGACAGAAAGGACCCGCAGGGAAGCTCCACCGTCTCAGGATTTGAGGTTCTGCTGCAAAAACAGCTGAAGGGAAAGCAGATGCAGAAAGAGATGGCCGAGTTTGTGCGGGAGAGGATCAAGATCGAGGAGGAGTACGCCAAGAGCCTGTCGAAGCTCTCGCAGATCCCGCTGGCGGCGCAGGAGGAAGGCACGCTTGGCGAAGCTTGGGCTCAGCTGAAGAAAAGTCTGGCAGACGAGGCAGAAGTTCATCTCAAATTCTCCTCGAAGCTTCAGAGTGAAGTGGAAAAACCTCTGCTGACATTTCGGGAAAACTTCAAAAAAGACATGAAAAAGTTTGACCATCACATGTCGGATCTCAGGAAGCAGCTGGCCAGCCGATACGCTGCTGTGGAGAAGGCACGTAAAGCTCTTTCAGATCGGCAGAAGGATCTAGAGTTGAAAACCCATCAGCTGGAGATCAAACTCAACAGTAAGATCGAGGAGGACATCAAGAAAGCGCGCCGGAAATCCACACAGGCAGGAGACGACCTGATGCGATGCGTCGACCTCTACAATCAGTCCCAGTCCAAGTGGTTTGAAGAGATGGTCACCAGCAGCCTGGAGCTTGAGCGGCTGGAGGTGGAGCGTGTGGAGATGATCAGACAACATCTGTGTCAGTACACAACGCTACGGCACGAAACCGACATGTTCAACCAGGGCACCATAGAGCCGGTGGACAAACTGCTGCGGAGCGTCGATCCCGCCAGAGACCGAGAGCTGTGGGTGAAAGAACACAGGACGGGACAGCAGAGACCGGCGGACATGGAGATCTGACGCCACCGGACACTTCTCGACCCCTCAATCGCTGTAACGCAGCAGATCGACTCAACAGATTGAAAGAACGCTCTCTATCAACCTGCTGAGGTTTACAGCCGGAACAAGAGAACGATCACGTCTCAAACTGAGCAGAAGGTCGAGAAAGAACCAAGGGTTTCTACCATGACCTTCCCACGAATTTGAGGGAAATGTGTGAGAGAATAAGTGTAAATATGTTGAGGATTTCACTCAGGAGAACCGATGTGTATGTCAGTATCTACTGATGCAATCAGACCATTAGCGTTGAACACTGACTGTCAGGCAAAGCGAGTTGATCTATATGGAAAAGTACTAATATATAAA

Function

symbol description
gas7b Orthologous to human GAS7 (growth arrest specific 7).
gas7 Enables identical protein binding activity. Predicted to be involved in actin filament polymerization and neuron projection morphogenesis. Predicted to act upstream of or within actin filament bundle assembly; neuron differentiation; and regulation of cell shape. Predicted to be located in ruffle. Predicted to be active in actin filament; cytoplasm; and plasma membrane.

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG:

id description
K18618 GAS7; growth arrest-specific protein 7

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000047_07072890_07079236.mRNA True 1161 mRNA 0.51 8 7072545 7079236

Neighbor

gene id symbol gene type direction distance location
CI01000047_07010651_07017023 NA coding downstream 55522 7010529 ~ 7017023 (-)
CI01000047_06993737_07007548 POLR3E coding downstream 64997 6993722 ~ 7007548 (-)
CI01000047_06978552_06982232 METTL9 coding downstream 90003 6978448 ~ 6982542 (-)
CI01000047_06968741_06972782 ERD2, KDELR2.L, ERD22, KDELR2, KDELR1, KDELR2A, KDELR2B coding downstream 99695 6968324 ~ 6972850 (-)
CI01000047_06958499_06967108 DAGLB coding downstream 104711 6957983 ~ 6967834 (-)
CI01000047_07137958_07149332 NA coding upstream 58148 7137384 ~ 7149332 (-)
CI01000047_07350018_07350608 NA coding upstream 269895 7349131 ~ 7350844 (-)
CI01000047_07351900_07353699 NA coding upstream 272631 7351867 ~ 7353753 (-)
CI01000047_07389650_07393323 NA coding upstream 309907 7389143 ~ 7393753 (-)
CI01000047_07436294_07437420 NA coding upstream 356496 7435732 ~ 7437719 (-)
G204149 NA non-coding downstream 9114 7063206 ~ 7063431 (-)
G204139 NA non-coding downstream 54215 7018123 ~ 7018330 (-)
G203947 NA non-coding downstream 174393 6896001 ~ 6898152 (-)
G204129 NA non-coding downstream 179365 6892834 ~ 6893180 (-)
G204098 NA non-coding downstream 219742 6852603 ~ 6852803 (-)
G203935 NA non-coding upstream 41217 7120453 ~ 7128069 (-)
G204167 NA non-coding upstream 205303 7284539 ~ 7285427 (-)
G204175 NA non-coding upstream 217304 7296540 ~ 7296838 (-)
G204177 NA non-coding upstream 219090 7298326 ~ 7298553 (-)
G204181 NA non-coding upstream 223810 7303046 ~ 7303290 (-)
G203881 NA other downstream 1028756 6043253 ~ 6043789 (-)
G203840 NA other downstream 1145201 5918508 ~ 5927344 (-)
G203286 NA other downstream 2195811 4874379 ~ 4876734 (-)
CI01000047_04575184_04576337 GNGT2B, GNGT2 other downstream 2495580 4574335 ~ 4576342 (-)
CI01000047_04285605_04286644 COA3A other downstream 2785864 4285227 ~ 4286694 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00013106 gas7,LOC106589492 coding CM030125.1 CM030125.1 21079606 ~ 21096419 (-)