CI01000047_07389650_07393323


Basic Information

Item Value
gene id CI01000047_07389650_07393323
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 7389143 ~ 7393753 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000047_07389650_07393323.mRNA
AGAATGAACCACAAAAAATGCGTTTATAGATTAAACAAAAATGAGTAAAAAAAAAAAAAAAAAAAAAAAGCATGGCTAATAGAAAGAAATCTGGCACCGGTGATCGCTTTAGTCTGATGCATGTGTCAGAGTTAGTGTCTAATCATTTAATTAGCTAACAATTAAGTTCGTCTCTACTTCTTCCCTCAGCAAGATGAGAAGCGACATGTAAAGGCTCGTTCGACAGGAGTTCATCGGGAATCGCCCAGCTGAGCCGAACACAACCCCACGATGAGGACAGAATATTTCAGTTAAATGAATGGCGCCTTTCATCAGAACCTCCACATCATCAGAGATGCAGGGCAGAGACGCCGTGAGAACCGCAGAGGATCAGTGCGCCTGAAGCCCACACCAACGCGAGCTGTCCAGGGTCCTGAAGACGCGCCGCGCCATGGGGATACGACACTTTCTGCTGCTGCTCATTTATCTGGACCCTCTTAACGTGTTTTGCACACAGACTGCCAAACGACCCAAAAAGACTCAGAAGATGAAGGAACTGAACGGCACCACCGTCGCACCGTCCGCGTCCACGCAGCGCATCACGGAGGTCCGTCCGGTTCTCACGCACGAGATCTGCCTGGGCTACTACGACGTGAGCGGCCAGTTCGACAAGGAGTTCGAGTGCAATAACACCGACCACCGCTACTGCTGCGGCTCGTGCTACTTGCGCTTCTGTTGCCAGTTTAAAGGCAACCGGTTAGACCAGAGAACATGCAAGAATTACCACAAGCCTGACTGGGTGAAAACTGTGCCCCCATCACCTGTCCCGACAGGTGATACTTATGACCCGAGCATGGACCAAACGAACACCGCGGTCTACATCACCTGTGGTGTCATTGCTTTTATTATAGTCCTTGGGGTTTCGACTAAAGTCGCGTATGACAAAGCAACCCAACCACCTCAGGAAATGAACATTCACAGGATCGGCTGCTCCTTTGTTTCTCCATATGGAAGATCTCATGTTCTAACAGGGCTGCATGTGATCACAATTGCAAGCAGAGTTTTAATATGCGTCTGTAGCACTGGTGCCAAGCTAACACCTTTCATTTTGACGTTTGGAGCCCTTGCAGATATACTTAGACAACAAGGACCAATTCCTATATCTCAATACGACTGTGAGAACTTTGCGGCGATGAACAGCTCATCCAAAGACGACACGCCACAGCGCACGGGCTCCAAAAACCACTACACCCCCGTTCACAGCTCCAAAACCAATCACGCCATGACTGAGTCGAACAACATCTCATTCCCAGGCAGCGAGGCCAATATTTTCACCAGAGACCCCCGGTCCTGTCCCGGGCCGACGTTAAGGGCCAGTGACAGCCTCTACAGAAGCGTGTGTAATTGGAGTGCTGTGTACTGATAGCATCTACTGAATCAACTCAAAGAGAAAATGCACGTCCACACGCCCGGATGAACAAGAGCGTTTACTGCAGGGAAAGACTTTGGTCCAAAATGATGTTTATGACATGATCTCGGTTTTCACTGTCTGTGAATAATTAGAGTTTTTATACTGTGAATAACAACTGGACTCTCTTTATCCAATCATACAGAATGTTGTTATAAAATGGCAGCCGTGACGAAGTGTAAAAAATGCTTCGCTTATAGAGGGATGAACACCATCTCAAGTGACTAAAGAATGATTTGACATTGAGAAACATGCATGCATAAAATATTTGATTAGAAATATCCCTGAACAAATAATAACAGAGCCTTTCTTCCAAAATAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGCGCAGTGAATGTGTTTCTGTAGGCGTTTGTGTGTATTTGCTCAAATATTGCTTTAAGAGATCAGCATTGCATGCATAAAATTTGTCTGGCTTATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000047_07389650_07393323.mRNA True 1909 mRNA 0.46 4 7389143 7393753

Neighbor

gene id symbol gene type direction distance location
CI01000047_07351900_07353699 NA coding downstream 35390 7351867 ~ 7353753 (-)
CI01000047_07350018_07350608 NA coding downstream 38299 7349131 ~ 7350844 (-)
CI01000047_07137958_07149332 NA coding downstream 239811 7137384 ~ 7149332 (-)
CI01000047_07072890_07079236 GAS7B, GAS7 coding downstream 309907 7072545 ~ 7079236 (-)
CI01000047_07010651_07017023 NA coding downstream 372120 7010529 ~ 7017023 (-)
CI01000047_07436294_07437420 NA coding upstream 41979 7435732 ~ 7437719 (-)
CI01000047_07445474_07451503 FOXK2 coding upstream 51106 7444859 ~ 7451503 (-)
CI01000047_07453486_07457736 WDR45B.S, WDR45B coding upstream 59035 7452788 ~ 7457949 (-)
CI01000047_07462130_07463407 NA coding upstream 67980 7461733 ~ 7463407 (-)
CI01000047_07511828_07514793 NA coding upstream 117202 7510955 ~ 7514793 (-)
G203943 NA non-coding downstream 20415 7355166 ~ 7368728 (-)
G204192 NA non-coding downstream 61297 7327497 ~ 7327846 (-)
G204186 NA non-coding downstream 77481 7311449 ~ 7311662 (-)
G204182 NA non-coding downstream 82549 7305979 ~ 7306594 (-)
G204181 NA non-coding downstream 85853 7303046 ~ 7303290 (-)
G203881 NA other downstream 1345354 6043253 ~ 6043789 (-)
G203840 NA other downstream 1461799 5918508 ~ 5927344 (-)
G203286 NA other downstream 2512409 4874379 ~ 4876734 (-)
CI01000047_04575184_04576337 GNGT2B, GNGT2 other downstream 2812178 4574335 ~ 4576342 (-)
CI01000047_04285605_04286644 COA3A other downstream 3102462 4285227 ~ 4286694 (-)

Expression


Co-expression Network