G200311



Basic Information


Item Value
gene id G200311
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 288886 ~ 289110 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU227314
GGGAGGTGAAAGAACTCCACCGGGCCACAGATTTGGCTCTCCGCGTCACCAAGCAGACGGCCCACTCCATAATCTCCATCGGCTGCCATGGATGTTGCGGAGAGTAATCTGTGGCTCAACCTATTCGGCAATAAAGGTCCTCTCAAAGGGGGATTGGTCCTCACCACACCACAGTGTGTCCAATTTCTCTAAATGCCCTCAGGATATCAGTCTGCTATCCCCGCC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU227314 True 225 lncRNA 0.54 1 288886 289110

Neighbor


gene id symbol gene type direction distance location
CI01000047_00235688_00240415 TACO1 coding downstream 48117 235516 ~ 240769 (-)
CI01000047_00209567_00227765 NA coding downstream 61121 209497 ~ 227765 (-)
CI01000047_00160239_00163260 NA coding downstream 125606 158824 ~ 163280 (-)
CI01000047_00124354_00130228 DNAJC9 coding downstream 158500 124003 ~ 130386 (-)
CI01000047_00103238_00106878 NA coding downstream 181858 102352 ~ 107028 (-)
CI01000047_00347663_00378777 NGFRB coding upstream 57623 346733 ~ 378777 (-)
CI01000047_00468782_00483200 MPP2B, MPP2 coding upstream 179298 468408 ~ 483200 (-)
CI01000047_00519408_00522108 PYYB coding upstream 230179 519108 ~ 522245 (-)
CI01000047_00532901_00545479 NDC80 coding upstream 242444 531554 ~ 545479 (-)
CI01000047_00546330_00551551 NA coding upstream 256846 545956 ~ 551551 (-)
G200310 NA non-coding downstream 745 287706 ~ 288141 (-)
G200309 NA non-coding downstream 1409 286958 ~ 287477 (-)
G200298 NA non-coding downstream 21460 267180 ~ 267426 (-)
G200293 NA non-coding downstream 28716 259966 ~ 260170 (-)
G200262 NA non-coding downstream 31616 156207 ~ 257270 (-)
G200307 NA non-coding upstream 16104 305214 ~ 306784 (-)
G200305 NA non-coding upstream 18124 307234 ~ 309179 (-)
G200316 NA non-coding upstream 24070 313180 ~ 313432 (-)
G200325 NA non-coding upstream 40296 329406 ~ 329618 (-)
G200329 NA non-coding upstream 48817 337927 ~ 338267 (-)
G200299 NA other downstream 20851 267530 ~ 268035 (-)
G200472 NA other upstream 544831 833941 ~ 834471 (-)
CI01000047_01708628_01744282 BICC1B, BICC1 other upstream 1416958 1706068 ~ 1744282 (-)
G202733 NA other upstream 2843203 3132313 ~ 3133652 (-)
G202944 NA other upstream 3508693 3985342 ~ 3986402 (-)

Expression



Co-expression Network