G200376


Basic Information

Item Value
gene id G200376
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 461430 ~ 463091 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU227393
TAAAGACTGGGAGACCACCTAAGACCAGTTCAGCTTTTTTTTTTTTTACTGGACGGATGGATGAACAGACAGATAGACAGATAGATAGATAGATAGATAGATAGACAGACAGATATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATGACAGACAGACAGACATGGATGTATAGATGGAAGACGGATGGACATAAAGATAGATGTCGGACGGACGGATAGATAGATAGATAGATAGATAGATAGATAGATGACGGACAGATGGAGAGACAGACCATCAGAGAGACAGACAGATAGATAGATGACAGACTGATGGACAGACTAACCAACGGACAGACAGACAGATGAATAGATAATGGACAGATGGATAGATAGATAGATGACAGACAGACAGACACATAGATAGATAGATGACGGATGGACGGACGGACGGACGGACGGACAGACTGACCAACAGATAGATGGATGACAGACAGACGGACTGACCAGCCAACGGACAGACAGACAGACGACGGACAGATGGACCAACCAATGGATGGACAGACAGACAGATGGATAGATGATGGATGGATAGATAGATAGATAGATAGATAGATGATGGACGGACGGACGGACGGATGGACAGACCGACTATCAGAGAGACAGACAGATAGATAGATAGATGACGTATGAATGGACAGACAAACCAACGGACAGACAGGCAGACAAATAGATGATGGACAGATGGACGGACGGACAGAGTGACCGACCAACAGACAGATAGATAGATGACGGACTGACAGGATAGATGACGGACGGACAGACCGACCAACAGTCAGACAGACAGATGGATAGATGACAGACTGACGGACAGACAGACAGACAGATGGATAGATGACAGATGGATGGACAGACCGACCAACAGAGAGACAGAAAGACAGACAAATAGATAGATGACGGACGGACAGACCGACCAACAGACAGACAGACAGATAGATAGATGGACGGACTGACCAACCAACGGATGGACAGACAGAGAGACAGATAGGTAGATGATGGACGGACAGACCAACCAACGAAGGGATGGACGGAAATAGACAGACGGATAGATAGATAGATGACGGACAGATGAACCGACCAACAGACAGACAGATATGTAGGTAGATGATGGACGGACGGACGGACGGAAAGACCGACCGACCAACGAACGAACGGACAGACAGACAGACAGATGGATGGATGGACGGGTGGATAGATAGACGTACCTCTGCATATGACGGTGGTGGACACACTAGCTCATATGGTGGTGGTGTGTACTCAGAATCTTCACTGGAGTCGGTCTCGTCTCGTTCCTCTCTCTCCTCTCTCACATGAATGGGATTTGGAATCACATAGATATGGTCGCTGTTTGACAGGTCGAGATCTGAGTCAGTGTCTGAGGCTTTCCTGCAGTATTTACAGCAGTACCTCAGCATACACAGACCCACAGTCAGTCCCACCAGCGGTGTCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU227393 True 1497 lncRNA 0.47 2 461430 463091

Neighbor

gene id symbol gene type direction distance location
CI01000047_00347663_00378777 NGFRB coding downstream 82653 346733 ~ 378777 (-)
CI01000047_00235688_00240415 TACO1 coding downstream 220661 235516 ~ 240769 (-)
CI01000047_00209567_00227765 NA coding downstream 233665 209497 ~ 227765 (-)
CI01000047_00160239_00163260 NA coding downstream 298150 158824 ~ 163280 (-)
CI01000047_00124354_00130228 DNAJC9 coding downstream 331044 124003 ~ 130386 (-)
CI01000047_00468782_00483200 MPP2B, MPP2 coding upstream 5317 468408 ~ 483200 (-)
CI01000047_00519408_00522108 PYYB coding upstream 56198 519108 ~ 522245 (-)
CI01000047_00532901_00545479 NDC80 coding upstream 68463 531554 ~ 545479 (-)
CI01000047_00546330_00551551 NA coding upstream 82865 545956 ~ 551551 (-)
CI01000047_00558772_00579870 NA coding upstream 94961 558052 ~ 580705 (-)
G200372 NA non-coding downstream 2258 458920 ~ 459172 (-)
G200332 NA non-coding downstream 119950 341154 ~ 341480 (-)
G200329 NA non-coding downstream 123163 337927 ~ 338267 (-)
G200325 NA non-coding downstream 131812 329406 ~ 329618 (-)
G200316 NA non-coding downstream 147998 313180 ~ 313432 (-)
G200387 NA non-coding upstream 1659 464750 ~ 465083 (-)
G200404 NA non-coding upstream 67513 530604 ~ 531055 (-)
G200440 NA non-coding upstream 307412 770503 ~ 770964 (-)
G200457 NA non-coding upstream 316357 779448 ~ 801732 (-)
G200459 NA non-coding upstream 317379 780470 ~ 782343 (-)
G200299 NA other downstream 193395 267530 ~ 268035 (-)
G200472 NA other upstream 370850 833941 ~ 834471 (-)
CI01000047_01708628_01744282 BICC1B, BICC1 other upstream 1242977 1706068 ~ 1744282 (-)
G202733 NA other upstream 2669222 3132313 ~ 3133652 (-)
G202944 NA other upstream 3334712 3985342 ~ 3986402 (-)

Expression


Co-expression Network