G200462


Basic Information

Item Value
gene id G200462
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 787374 ~ 787712 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU227488
AAAAAAACGAAATAACTGACATGGGAAAATTACGTCAGTTAGAGGTCCTGAATTTCAGTTTCGATTACATTTCAATTAATCGTCCAGCCCTAGTTAAAAGGCATGTTCTTTTTAAAAAAATGTTTTTCACTAAATGAACACAAGGAATAACATTTTTTTTAAGATTATTAGTCTTATTCAGCAAGGATACATTAAATTAATCAAAAGTGACAGTAACACGTTTATAATGTTACGAAAGATTTCTATCTCGAATAAATGCTGTTCTTTTGAACTTTCTATTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU227488 True 282 lncRNA 0.28 2 787374 787712

Neighbor

gene id symbol gene type direction distance location
CI01000047_00701972_00715090 GCP2, TUBGCP2 coding downstream 72284 701972 ~ 715090 (-)
CI01000047_00654212_00689092 MYOF coding downstream 98282 653448 ~ 689092 (-)
CI01000047_00620874_00645283 NA coding downstream 142091 620756 ~ 645283 (-)
CI01000047_00611745_00618340 RAC2, RAC3, RAC3A, RAC1, RAC1A, RAC1B, RAC3.S, RAC3B, RAC1.L coding downstream 169034 610742 ~ 618340 (-)
CI01000047_00590846_00598816 UQCRC2B coding downstream 188558 590645 ~ 598816 (-)
CI01000047_00884469_00889027 NA coding upstream 95986 883698 ~ 889027 (-)
CI01000047_00892063_00896561 NA coding upstream 102921 890633 ~ 896561 (-)
CI01000047_01071329_01073839 NRBF2B, NRBF2 coding upstream 282590 1070302 ~ 1073839 (-)
CI01000047_01119401_01120162 ADOA coding upstream 331440 1119152 ~ 1120233 (-)
CI01000047_01175229_01292056 ARID5B coding upstream 386876 1174588 ~ 1292056 (-)
G200459 NA non-coding downstream 5031 780470 ~ 782343 (-)
G200440 NA non-coding downstream 16410 770503 ~ 770964 (-)
G200404 NA non-coding downstream 256319 530604 ~ 531055 (-)
G200387 NA non-coding downstream 322291 464750 ~ 465083 (-)
G200376 NA non-coding downstream 324283 461430 ~ 463091 (-)
G200468 NA non-coding upstream 27615 815327 ~ 816315 (-)
G200469 NA non-coding upstream 28897 816609 ~ 817078 (-)
G200470 NA non-coding upstream 45474 833186 ~ 833457 (-)
G200471 NA non-coding upstream 45798 833510 ~ 833867 (-)
G200479 NA non-coding upstream 60131 847843 ~ 848067 (-)
CI01000047_00519408_00522108 PYYB other downstream 265132 519108 ~ 522245 (-)
G200299 NA other downstream 519339 267530 ~ 268035 (-)
G200472 NA other upstream 46229 833941 ~ 834471 (-)
CI01000047_01708628_01744282 BICC1B, BICC1 other upstream 918356 1706068 ~ 1744282 (-)
G202733 NA other upstream 2344601 3132313 ~ 3133652 (-)
G202944 NA other upstream 3010091 3985342 ~ 3986402 (-)
CI01000047_04213574_04213976 NA other upstream 3425697 4213409 ~ 4214085 (-)

Expression


Co-expression Network