G200472


Basic Information

Item Value
gene id G200472
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 833941 ~ 834471 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU227498
ACTGCTCAACAAACTATTATTTTCTAGTGTAATACTTTGGCAGGGAGTTAAATTCAGTTAACACCGGACCACCACGACTGGTATTGTGCCGAATTCTGACCCCCGCCAAATTATTACCCCCCCTAGTATTAGTAGGTTTAGGATTAGGTGTGGGGGTGGGTTTAGGATTAGGCAATCAGGTAGAGACTTCAATGAGGGGGGTAATAATTTGGCAGGGAGTCAAAATTCAGCACAACACCAGCAACAATGACATAATCCCCGTGTCCCAAAGGCTCATCTTCAGGATCCAGTGCTGTGTTACTGCTGTATCAGAGAAAAGACAAGGTGCTTGTGCGCCAGTGTCAAAAGTTAATTCCTTGCTTGTTTTTGTAAATGATGCAATAAACAAAATGATGACTGGCTATAGAGAATCGACGACTGGGTCATCTTTGGTGTTGCTTGTTATAAATATTGGAGGTTTTTATGGTCCACCTTCAGTGATGACATACTGACTGAAGGGCCTTAAATATTTGCCAATAATAGGCCTATATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU227498 True 531 TUCP 0.42 1 833941 834471

Neighbor

gene id symbol gene type direction distance location
CI01000047_00701972_00715090 GCP2, TUBGCP2 coding downstream 118851 701972 ~ 715090 (-)
CI01000047_00654212_00689092 MYOF coding downstream 144849 653448 ~ 689092 (-)
CI01000047_00620874_00645283 NA coding downstream 188658 620756 ~ 645283 (-)
CI01000047_00611745_00618340 RAC2, RAC3, RAC3A, RAC1, RAC1A, RAC1B, RAC3.S, RAC3B, RAC1.L coding downstream 215601 610742 ~ 618340 (-)
CI01000047_00590846_00598816 UQCRC2B coding downstream 235125 590645 ~ 598816 (-)
CI01000047_00884469_00889027 NA coding upstream 49227 883698 ~ 889027 (-)
CI01000047_00892063_00896561 NA coding upstream 56162 890633 ~ 896561 (-)
CI01000047_01071329_01073839 NRBF2B, NRBF2 coding upstream 235831 1070302 ~ 1073839 (-)
CI01000047_01119401_01120162 ADOA coding upstream 284681 1119152 ~ 1120233 (-)
CI01000047_01175229_01292056 ARID5B coding upstream 340117 1174588 ~ 1292056 (-)
G200471 NA non-coding downstream 74 833510 ~ 833867 (-)
G200470 NA non-coding downstream 484 833186 ~ 833457 (-)
G200469 NA non-coding downstream 16863 816609 ~ 817078 (-)
G200468 NA non-coding downstream 17626 815327 ~ 816315 (-)
G200457 NA non-coding downstream 32209 779448 ~ 801732 (-)
G200479 NA non-coding upstream 13372 847843 ~ 848067 (-)
G200607 NA non-coding upstream 257413 1091884 ~ 1092263 (-)
G200609 NA non-coding upstream 263190 1097661 ~ 1097894 (-)
G200626 NA non-coding upstream 299674 1134145 ~ 1142557 (-)
G200652 NA non-coding upstream 489026 1323497 ~ 1323757 (-)
CI01000047_00519408_00522108 PYYB other downstream 311699 519108 ~ 522245 (-)
G200299 NA other downstream 565906 267530 ~ 268035 (-)
CI01000047_01708628_01744282 BICC1B, BICC1 other upstream 871597 1706068 ~ 1744282 (-)
G202733 NA other upstream 2297842 3132313 ~ 3133652 (-)
G202944 NA other upstream 2963332 3985342 ~ 3986402 (-)
CI01000047_04213574_04213976 NA other upstream 3378938 4213409 ~ 4214085 (-)
CI01000047_04285605_04286644 COA3A other upstream 3444437 4285227 ~ 4286694 (-)

Expression


Co-expression Network