G200479


Basic Information

Item Value
gene id G200479
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 847843 ~ 848067 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU227505
AGTTGCCATACAAACGAAAAACATAGTTGTAAACTAGTTGTGTACTCAAAGTTTACTACTGTTACACTTAAAGTATACTTAAAAGTATACTTCTATACACTAAAAAGTGGGCCAATTTAGTCCCAAGTAGTGTTGAAATAGTACACTTACAAGTCTACTACTAGAACATTGATATTAGTATACTTCCTACATAAAGTATACTTAAAAATATACTTGGGCTGTGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU227505 True 225 lncRNA 0.31 1 847843 848067

Neighbor

gene id symbol gene type direction distance location
CI01000047_00701972_00715090 GCP2, TUBGCP2 coding downstream 132753 701972 ~ 715090 (-)
CI01000047_00654212_00689092 MYOF coding downstream 158751 653448 ~ 689092 (-)
CI01000047_00620874_00645283 NA coding downstream 202560 620756 ~ 645283 (-)
CI01000047_00611745_00618340 RAC2, RAC3, RAC3A, RAC1, RAC1A, RAC1B, RAC3.S, RAC3B, RAC1.L coding downstream 229503 610742 ~ 618340 (-)
CI01000047_00590846_00598816 UQCRC2B coding downstream 249027 590645 ~ 598816 (-)
CI01000047_00884469_00889027 NA coding upstream 35631 883698 ~ 889027 (-)
CI01000047_00892063_00896561 NA coding upstream 42566 890633 ~ 896561 (-)
CI01000047_01071329_01073839 NRBF2B, NRBF2 coding upstream 222235 1070302 ~ 1073839 (-)
CI01000047_01119401_01120162 ADOA coding upstream 271085 1119152 ~ 1120233 (-)
CI01000047_01175229_01292056 ARID5B coding upstream 326521 1174588 ~ 1292056 (-)
G200471 NA non-coding downstream 13976 833510 ~ 833867 (-)
G200470 NA non-coding downstream 14386 833186 ~ 833457 (-)
G200469 NA non-coding downstream 30765 816609 ~ 817078 (-)
G200468 NA non-coding downstream 31528 815327 ~ 816315 (-)
G200462 NA non-coding downstream 60131 787374 ~ 787712 (-)
G200607 NA non-coding upstream 243817 1091884 ~ 1092263 (-)
G200609 NA non-coding upstream 249594 1097661 ~ 1097894 (-)
G200626 NA non-coding upstream 286078 1134145 ~ 1142557 (-)
G200652 NA non-coding upstream 475430 1323497 ~ 1323757 (-)
G200657 NA non-coding upstream 479327 1327394 ~ 1327615 (-)
G200472 NA other downstream 13372 833941 ~ 834471 (-)
CI01000047_00519408_00522108 PYYB other downstream 325601 519108 ~ 522245 (-)
G200299 NA other downstream 579808 267530 ~ 268035 (-)
CI01000047_01708628_01744282 BICC1B, BICC1 other upstream 858001 1706068 ~ 1744282 (-)
G202733 NA other upstream 2284246 3132313 ~ 3133652 (-)
G202944 NA other upstream 2949736 3985342 ~ 3986402 (-)
CI01000047_04213574_04213976 NA other upstream 3365342 4213409 ~ 4214085 (-)
CI01000047_04285605_04286644 COA3A other upstream 3430841 4285227 ~ 4286694 (-)

Expression


Co-expression Network