G200850



Basic Information


Item Value
gene id G200850
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 1699974 ~ 1700241 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU227897
TCTAACCACCAAACTCATTCCTAAGATTTAGGCAAGGACTGCCATAAAAATTCCTTCAGGACCCCCTGGATGGAGCAGCAGTGACTGAAATAAAGAGAGGCCACAGAGATCTATCTAAATCCATTCATACCTATGTTTGGAGGCCTTAATTTGATCGAAACTGCATCACATCCACTCCATCTTCATGCAAAGCACAGTTTATGTTAATGGTTACTGACTGTTAAAACAACAGGTCATGGGACAGTCCTGTTAACAGATAAACAAATGC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU227897 True 268 lncRNA 0.41 1 1699974 1700241

Neighbor


gene id symbol gene type direction distance location
CI01000047_01654684_01688086 PHYHIPL, PHYHIPLB coding downstream 11666 1654138 ~ 1688308 (-)
CI01000047_01470439_01470729 NA coding downstream 229180 1470399 ~ 1470794 (-)
CI01000047_01404421_01451987 NA coding downstream 247921 1404371 ~ 1452053 (-)
CI01000047_01375108_01392690 RHOBTB1.S, RHOBTB2, RHOBTB1 coding downstream 307284 1374913 ~ 1392690 (-)
CI01000047_01373782_01374697 NA coding downstream 325120 1373782 ~ 1374854 (-)
CI01000047_01708628_01744282 BICC1B, BICC1 coding upstream 8279 1706068 ~ 1744282 (-)
CI01000047_01813106_01813800 NA coding upstream 112616 1812857 ~ 1814122 (-)
CI01000047_01823330_01823581 NA coding upstream 123031 1823272 ~ 1823581 (-)
CI01000047_01824882_01828103 TFAM coding upstream 124641 1824882 ~ 1828952 (-)
CI01000047_02317565_02318902 DKK1B coding upstream 616958 2317199 ~ 2318963 (-)
G200847 NA non-coding downstream 4523 1695217 ~ 1695451 (-)
G200827 NA non-coding downstream 73128 1626621 ~ 1626846 (-)
G200711 NA non-coding downstream 92521 1606841 ~ 1607453 (-)
G200712 NA non-coding downstream 93322 1606285 ~ 1606652 (-)
G200720 NA non-coding downstream 146641 1552004 ~ 1553333 (-)
G200869 NA non-coding upstream 160341 1860582 ~ 1860871 (-)
G200880 NA non-coding upstream 188516 1888757 ~ 1889106 (-)
G200889 NA non-coding upstream 223419 1923660 ~ 1923995 (-)
G200890 NA non-coding upstream 230696 1930937 ~ 1934351 (-)
G200912 NA non-coding upstream 304350 2004591 ~ 2004815 (-)
G200472 NA other downstream 865503 833941 ~ 834471 (-)
CI01000047_00519408_00522108 PYYB other downstream 1177732 519108 ~ 522245 (-)
G200299 NA other downstream 1431939 267530 ~ 268035 (-)
G202733 NA other upstream 1432072 3132313 ~ 3133652 (-)
G202944 NA other upstream 2097562 3985342 ~ 3986402 (-)
CI01000047_04213574_04213976 NA other upstream 2513168 4213409 ~ 4214085 (-)
CI01000047_04285605_04286644 COA3A other upstream 2578667 4285227 ~ 4286694 (-)

Expression



Co-expression Network