G199841


Basic Information

Item Value
gene id G199841
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 1888628 ~ 1889276 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU226805
ATAAAGCAGAGCCTCAATAGCGTGCGGTGGGTTTGGTGGGGGGTAATTGAGAATGAATGGGGGAAAGTCACGTGAGAGGAGGCAATGCCTCAGTTGCGCTATGACTGGATATGATCGGTTACGATTGGACATGATTGGTTAGTGCGATAAATCCCGCCTCTTGTTTTCGTGCGCGTTCTCGTCGAATCGGCCTGAATGAAGACAGTGATGGCGTTAATGGGAAGACTAATTAAAAAGTAAGTAAACAACTGTCACTTACATATCACCGCTTTGTGTCATGTCAAAATCAAACTCGAAATGGCCTGAAAACATGATGACTCGGGGTTTTTTAGTGAGCAATCAGTGTGGTGAAATTAAAGGTACATCTTTGTGTCTGTGACCACTGACCAGTGTGTACAAGCTTGATGACTGCTGAAAATAAATTGACTATTAAAAGAAAAGCTGAATATTAGTTTATAAATAATATACATTGTTTAAATTGTTACTGCCTTTAGTTATTATTTTGGAATAAATGTAAAAATGAGTAAAAACACTAACTTGATTAAATTTATACTTGGTTTTAATAAATAGAACATTATAGTGTAAAAATACAAAATAGAATTGTATTTGGTCTCTCTTTTTATGTAATGTTAACTTAAAATTGTGTATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU226805 True 649 lncRNA 0.36 1 1888628 1889276

Neighbor

gene id symbol gene type direction distance location
CI01000047_01838291_01856228 IPMK coding upstream 32039 1837443 ~ 1856589 (+)
CI01000047_01831728_01834017 UBE2D4, UBE2D4.L, UBE2D1A, UBE2D1B, UBE2D1 coding upstream 54611 1831728 ~ 1834017 (+)
CI01000047_01814588_01822344 NA coding upstream 65693 1814488 ~ 1822935 (+)
CI01000047_01749606_01752688 NA coding upstream 135940 1749606 ~ 1752688 (+)
CI01000047_01707211_01707504 NA coding upstream 181106 1706478 ~ 1707522 (+)
CI01000047_02105957_02212505 PCDH15B, PCDH15 coding downstream 216681 2105957 ~ 2212514 (+)
CI01000047_02233861_02257560 NA coding downstream 344317 2233593 ~ 2258422 (+)
CI01000047_02265701_02270952 PCDH15 coding downstream 376425 2265701 ~ 2271665 (+)
CI01000047_02496216_02496407 NA coding downstream 606940 2496216 ~ 2496521 (+)
CI01000047_02498979_02505234 A1CF coding downstream 609298 2498574 ~ 2505743 (+)
G199838 NA non-coding upstream 5188 1883215 ~ 1883440 (+)
G199837 NA non-coding upstream 5851 1882495 ~ 1882777 (+)
G199767 NA non-coding upstream 28380 1856742 ~ 1860248 (+)
G199790 NA non-coding upstream 122866 1764828 ~ 1765762 (+)
G199734 NA non-coding upstream 182812 1705520 ~ 1705816 (+)
G199850 NA non-coding downstream 19428 1908704 ~ 1909212 (+)
G199875 NA non-coding downstream 62775 1952051 ~ 1952305 (+)
G199895 NA non-coding downstream 120400 2009676 ~ 2010000 (+)
G200005 NA non-coding downstream 433351 2322627 ~ 2322840 (+)
G200006 NA non-coding downstream 433684 2322960 ~ 2325338 (+)
G199386 NA other upstream 923172 929871 ~ 965456 (+)
CI01000047_00773429_00831230 EXOC6 other upstream 1056018 773429 ~ 832610 (+)
G199401 NA other upstream 1071544 816480 ~ 817084 (+)
G199380 NA other upstream 1426952 460019 ~ 461676 (+)
G200003 NA other downstream 427587 2316863 ~ 2318962 (+)
G200076 NA other downstream 631320 2520596 ~ 2577997 (+)
G201186 NA other downstream 1129429 3018705 ~ 3088187 (+)
G201387 NA other downstream 1807240 3696516 ~ 3701860 (+)
G201599 NA other downstream 2526537 4415813 ~ 4482457 (+)

Expression


Co-expression Network