G200949


Basic Information

Item Value
gene id G200949
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 2114628 ~ 2140425 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU228010
TGCAAAGAGAGAACATTAGCGCAGTGTAAGCGCCTCCCCAATAAAGTGTGAGCCTCTGAGACCGTACCTCTGATGCTGTTTTCAATTTTAATTTGCTTTTCTAAATGCTCCATAGCGCAGGAGCTTTGGTTAACATCAGAGGAACATTTCTATACACACACACACATCCCTCAGGACATGTGAAAATGATTGCTGTCTGAGCAGAGAGAGTCCTCACCTCCTCGATGTCGTTATCCAGGGCGATAATGGCGAGGGGGGTGGAGAGATTGGCACTGCTCGAGATAGTTGTGCCCAGCGGAGCAGACTCCGAGATGAATCCATGATAAGTGGCCACCTGGAAGTACGGTGCCTGATTGTTCTCATCAAGCACCTCAATGTGGAGATTAGCGAACGCTGGGAGAGGGTGTCCGTTATCCTGCTCTGCCTTGATTACCAAGTCGAAATGCTGGTACTGTTCTCTGCTGATGGGTTTCAGGAGCTGGAGCTCAGCTGTAGTCCGATTCAAGGAGAAATACTGTGCATATGGCGCGGGTTTTCCGATGAGAATGGAGTACAGGATTCCCGGGCGGTCTGATGGTGGCTGGATGTTTCTGTCTTGATCAACAGCTTGAATGGGAGGAGTCACATTGACAGGGTTTACTCGGCTCGGATCTGTGAGCTCCAGGATGCTGGCACGGTACGTAAGAGGTTTGCAGTCACGCGTGTTGTCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU228010 True 711 lncRNA 0.50 4 2114628 2140425

Neighbor

gene id symbol gene type direction distance location
CI01000047_01824882_01828103 TFAM coding downstream 285676 1824882 ~ 1828952 (-)
CI01000047_01823330_01823581 NA coding downstream 291047 1823272 ~ 1823581 (-)
CI01000047_01813106_01813800 NA coding downstream 300506 1812857 ~ 1814122 (-)
CI01000047_01708628_01744282 BICC1B, BICC1 coding downstream 370346 1706068 ~ 1744282 (-)
CI01000047_01654684_01688086 PHYHIPL, PHYHIPLB coding downstream 426320 1654138 ~ 1688308 (-)
CI01000047_02317565_02318902 DKK1B coding upstream 176774 2317199 ~ 2318963 (-)
CI01000047_02325268_02476792 PRKG1A, PRKG1, PRKG1B coding upstream 184843 2325268 ~ 2476792 (-)
CI01000047_02480919_02482057 NA coding upstream 340026 2480451 ~ 2483286 (-)
CI01000047_02507950_02519956 ASAH2 coding upstream 367183 2507608 ~ 2520199 (-)
CI01000047_02524134_02533163 SGMS1 coding upstream 383689 2524114 ~ 2533351 (-)
G200948 NA non-coding downstream 1100 2112158 ~ 2113528 (-)
G200919 NA non-coding downstream 84394 2029820 ~ 2030234 (-)
G200912 NA non-coding downstream 109813 2004591 ~ 2004815 (-)
G200890 NA non-coding downstream 180277 1930937 ~ 1934351 (-)
G200889 NA non-coding downstream 190633 1923660 ~ 1923995 (-)
G201026 NA non-coding upstream 201376 2341801 ~ 2342325 (-)
G201030 NA non-coding upstream 218189 2358614 ~ 2358910 (-)
G201032 NA non-coding upstream 220795 2361220 ~ 2361489 (-)
G201034 NA non-coding upstream 227410 2367835 ~ 2368079 (-)
G201037 NA non-coding upstream 299385 2439810 ~ 2440146 (-)
G200472 NA other downstream 1280157 833941 ~ 834471 (-)
CI01000047_00519408_00522108 PYYB other downstream 1592386 519108 ~ 522245 (-)
G200299 NA other downstream 1846593 267530 ~ 268035 (-)
G202733 NA other upstream 991888 3132313 ~ 3133652 (-)
G202944 NA other upstream 1657378 3985342 ~ 3986402 (-)
CI01000047_04213574_04213976 NA other upstream 2072984 4213409 ~ 4214085 (-)
CI01000047_04285605_04286644 COA3A other upstream 2138483 4285227 ~ 4286694 (-)
CI01000047_04575184_04576337 GNGT2B, GNGT2 other upstream 2433910 4574335 ~ 4576342 (-)

Expression


Co-expression Network