G200025


Basic Information

Item Value
gene id G200025
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 2352060 ~ 2352269 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU226998
GAAAAAAAGAAAAGCTTTAAAAATGAATATTTCTAAAACAATAATTATAAAAGCAGCACTTTGCCAAGAATGTTGAGCCTAATCTCTGCCAAACAGACATGCTGGTTTTTTGGTCCACCAAGTCATACTCAGTAGAAAAACAAAGTATATAAGTATTTACTTGAATCAACCTATCTTTTCTTTTTTTTTATAATGTCTTTTACTTTTAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU226998 True 210 lncRNA 0.28 1 2352060 2352269

Neighbor

gene id symbol gene type direction distance location
CI01000047_02265701_02270952 PCDH15 coding upstream 80395 2265701 ~ 2271665 (+)
CI01000047_02233861_02257560 NA coding upstream 93638 2233593 ~ 2258422 (+)
CI01000047_02105957_02212505 PCDH15B, PCDH15 coding upstream 139546 2105957 ~ 2212514 (+)
CI01000047_01838291_01856228 IPMK coding upstream 495471 1837443 ~ 1856589 (+)
CI01000047_01831728_01834017 UBE2D4, UBE2D4.L, UBE2D1A, UBE2D1B, UBE2D1 coding upstream 518043 1831728 ~ 1834017 (+)
CI01000047_02496216_02496407 NA coding downstream 143947 2496216 ~ 2496521 (+)
CI01000047_02498979_02505234 A1CF coding downstream 146305 2498574 ~ 2505743 (+)
CI01000047_02562428_02569496 AARSD1 coding downstream 210024 2562293 ~ 2570388 (+)
CI01000047_02581276_02587652 G6PCA.1 coding downstream 228650 2580919 ~ 2589521 (+)
CI01000047_02602977_02614833 MYST2, KAT7B, KAT7 coding downstream 250708 2602977 ~ 2615082 (+)
G200008 NA non-coding upstream 7224 2344472 ~ 2344836 (+)
G200022 NA non-coding upstream 11170 2340037 ~ 2340890 (+)
G200021 NA non-coding upstream 12166 2339668 ~ 2339894 (+)
G200017 NA non-coding upstream 15592 2336267 ~ 2336468 (+)
G200016 NA non-coding upstream 16261 2335360 ~ 2335799 (+)
G200027 NA non-coding downstream 1022 2353291 ~ 2353544 (+)
G200032 NA non-coding downstream 8524 2360793 ~ 2361133 (+)
G200033 NA non-coding downstream 9006 2361275 ~ 2361506 (+)
G200035 NA non-coding downstream 11339 2363608 ~ 2363820 (+)
G200036 NA non-coding downstream 12786 2365055 ~ 2365276 (+)
G200003 NA other upstream 33098 2316863 ~ 2318962 (+)
CI01000047_01749606_01752688 NA other upstream 599223 1749606 ~ 1752688 (+)
G199386 NA other upstream 1386604 929871 ~ 965456 (+)
CI01000047_00773429_00831230 EXOC6 other upstream 1519450 773429 ~ 832610 (+)
G199401 NA other upstream 1534976 816480 ~ 817084 (+)
G200076 NA other downstream 168327 2520596 ~ 2577997 (+)
G201186 NA other downstream 666436 3018705 ~ 3088187 (+)
G201387 NA other downstream 1344247 3696516 ~ 3701860 (+)
G201599 NA other downstream 2063544 4415813 ~ 4482457 (+)
G202382 NA other downstream 4463448 6815717 ~ 6816118 (+)

Expression


Co-expression Network