G200061


Basic Information

Item Value
gene id G200061
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 2422891 ~ 2423144 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU227037
ATTTCAAGCAGTTGAGATTTGCTATATAGTATATCGCCCCTATGTGAATATGCTGTATGTATGTGGATAAAGTTAGACATATGTATATATCCATTAAATTATAAAAAAATAAAAAAAAGAAGACTCTCTAGTATATGGTATTATCATTGTCAGATAGTCTAGCCTGCGGATTACCAATAATGTGAAACAAAATATTCATTTATACAGATCTTTCTAATAAGATAAACAGCACCATGGCAAATGCCACATATCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU227037 True 254 lncRNA 0.30 1 2422891 2423144

Neighbor

gene id symbol gene type direction distance location
CI01000047_02265701_02270952 PCDH15 coding upstream 151226 2265701 ~ 2271665 (+)
CI01000047_02233861_02257560 NA coding upstream 164469 2233593 ~ 2258422 (+)
CI01000047_02105957_02212505 PCDH15B, PCDH15 coding upstream 210377 2105957 ~ 2212514 (+)
CI01000047_01838291_01856228 IPMK coding upstream 566302 1837443 ~ 1856589 (+)
CI01000047_01831728_01834017 UBE2D4, UBE2D4.L, UBE2D1A, UBE2D1B, UBE2D1 coding upstream 588874 1831728 ~ 1834017 (+)
CI01000047_02496216_02496407 NA coding downstream 73072 2496216 ~ 2496521 (+)
CI01000047_02498979_02505234 A1CF coding downstream 75430 2498574 ~ 2505743 (+)
CI01000047_02562428_02569496 AARSD1 coding downstream 139149 2562293 ~ 2570388 (+)
CI01000047_02581276_02587652 G6PCA.1 coding downstream 157775 2580919 ~ 2589521 (+)
CI01000047_02602977_02614833 MYST2, KAT7B, KAT7 coding downstream 179833 2602977 ~ 2615082 (+)
G200060 NA non-coding upstream 1541 2420172 ~ 2421350 (+)
G200059 NA non-coding upstream 3975 2418558 ~ 2418916 (+)
G200041 NA non-coding upstream 39393 2383297 ~ 2383498 (+)
G200040 NA non-coding upstream 41906 2380673 ~ 2380985 (+)
G200010 NA non-coding upstream 42460 2380034 ~ 2380431 (+)
G200062 NA non-coding downstream 1201 2424345 ~ 2425243 (+)
G200063 NA non-coding downstream 3115 2426259 ~ 2426613 (+)
G200065 NA non-coding downstream 5754 2428898 ~ 2429659 (+)
G200066 NA non-coding downstream 6831 2429975 ~ 2430216 (+)
G200011 NA non-coding downstream 58681 2481825 ~ 2482207 (+)
G200003 NA other upstream 103929 2316863 ~ 2318962 (+)
CI01000047_01749606_01752688 NA other upstream 670054 1749606 ~ 1752688 (+)
G199386 NA other upstream 1457435 929871 ~ 965456 (+)
CI01000047_00773429_00831230 EXOC6 other upstream 1590281 773429 ~ 832610 (+)
G199401 NA other upstream 1605807 816480 ~ 817084 (+)
G200076 NA other downstream 97452 2520596 ~ 2577997 (+)
G201186 NA other downstream 595561 3018705 ~ 3088187 (+)
G201387 NA other downstream 1273372 3696516 ~ 3701860 (+)
G201599 NA other downstream 1992669 4415813 ~ 4482457 (+)
G202382 NA other downstream 4392573 6815717 ~ 6816118 (+)

Expression


Co-expression Network