G200063


Basic Information

Item Value
gene id G200063
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 2426259 ~ 2426613 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU227039
ATGGCAACAAGCGACTCACTGCACTTAATGCAACAATGAACTGGAGTGACAGATAATGCGTTGCTCTCTAAATTTTAGCTGCTAATGCCCTTAATGAGTCTGGATGCCGAAATCAAAGAGGGAGCTTTGTGTGGCTGGCTGTCTTTGAATGGGACCTTTCTCCATACACACAGAGCTAATGAGGTTTCAAATCAGAGGTCTACAGCAAAGTACACACACTGTCTTACTCTGTTTGTGTGTTTTATCTCTTCAAAATCATACTTCTGTGCTACAATATTAGTAGCGTGACCCACATCCATTTTTCACTCTACCAAGTGTATGGAATTTTATTATCTAACAAGAATGACTTTCATTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU227039 True 355 lncRNA 0.40 1 2426259 2426613

Neighbor

gene id symbol gene type direction distance location
CI01000047_02265701_02270952 PCDH15 coding upstream 154594 2265701 ~ 2271665 (+)
CI01000047_02233861_02257560 NA coding upstream 167837 2233593 ~ 2258422 (+)
CI01000047_02105957_02212505 PCDH15B, PCDH15 coding upstream 213745 2105957 ~ 2212514 (+)
CI01000047_01838291_01856228 IPMK coding upstream 569670 1837443 ~ 1856589 (+)
CI01000047_01831728_01834017 UBE2D4, UBE2D4.L, UBE2D1A, UBE2D1B, UBE2D1 coding upstream 592242 1831728 ~ 1834017 (+)
CI01000047_02496216_02496407 NA coding downstream 69603 2496216 ~ 2496521 (+)
CI01000047_02498979_02505234 A1CF coding downstream 71961 2498574 ~ 2505743 (+)
CI01000047_02562428_02569496 AARSD1 coding downstream 135680 2562293 ~ 2570388 (+)
CI01000047_02581276_02587652 G6PCA.1 coding downstream 154306 2580919 ~ 2589521 (+)
CI01000047_02602977_02614833 MYST2, KAT7B, KAT7 coding downstream 176364 2602977 ~ 2615082 (+)
G200062 NA non-coding upstream 1016 2424345 ~ 2425243 (+)
G200061 NA non-coding upstream 3115 2422891 ~ 2423144 (+)
G200060 NA non-coding upstream 4909 2420172 ~ 2421350 (+)
G200059 NA non-coding upstream 7343 2418558 ~ 2418916 (+)
G200041 NA non-coding upstream 42761 2383297 ~ 2383498 (+)
G200065 NA non-coding downstream 2285 2428898 ~ 2429659 (+)
G200066 NA non-coding downstream 3362 2429975 ~ 2430216 (+)
G200011 NA non-coding downstream 55212 2481825 ~ 2482207 (+)
G200090 NA non-coding downstream 153336 2579949 ~ 2580406 (+)
G200130 NA non-coding downstream 158837 2585450 ~ 2586875 (+)
G200003 NA other upstream 107297 2316863 ~ 2318962 (+)
CI01000047_01749606_01752688 NA other upstream 673422 1749606 ~ 1752688 (+)
G199386 NA other upstream 1460803 929871 ~ 965456 (+)
CI01000047_00773429_00831230 EXOC6 other upstream 1593649 773429 ~ 832610 (+)
G199401 NA other upstream 1609175 816480 ~ 817084 (+)
G200076 NA other downstream 93983 2520596 ~ 2577997 (+)
G201186 NA other downstream 592092 3018705 ~ 3088187 (+)
G201387 NA other downstream 1269903 3696516 ~ 3701860 (+)
G201599 NA other downstream 1989200 4415813 ~ 4482457 (+)
G202382 NA other downstream 4389104 6815717 ~ 6816118 (+)

Expression


Co-expression Network