G200158


Basic Information

Item Value
gene id G200158
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 2657992 ~ 2666602 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU227145
ATTATTATTGTTGCCTCTAGTAATTATGTGTCTGATTTTTAATTTCCAACCTATTGTTGTGCTTTAGTCTTTCCTTTAACAGGTTCCGAGGAGGCGTGAAGAGAAGCACACAACAAAGCGAATCCGTTTCAGGAACTTTACTCATTAAACCACAGCTTTACAACAGCGGGGGTTTATGCTCTTGCCCAGCGCTGATGGGTTTATATACAACCATCCGCACCGAAGCCTGCGAGCATACTGACGCTAAACATAAACAAACAGTGAACTAAACCCCGCGTGATGACGTAGCCACATCTGATTGGCTAATACAGAACTTATTATGAATACATGAAATAACAGTAACACAAACAACTTATTTTAATTAACTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU227145 True 369 lncRNA 0.39 2 2657992 2666602

Neighbor

gene id symbol gene type direction distance location
CI01000047_02602977_02614833 MYST2, KAT7B, KAT7 coding upstream 42910 2602977 ~ 2615082 (+)
CI01000047_02581276_02587652 G6PCA.1 coding upstream 68471 2580919 ~ 2589521 (+)
CI01000047_02562428_02569496 AARSD1 coding upstream 87604 2562293 ~ 2570388 (+)
CI01000047_02498979_02505234 A1CF coding upstream 152249 2498574 ~ 2505743 (+)
CI01000047_02496216_02496407 NA coding upstream 161471 2496216 ~ 2496521 (+)
CI01000047_02738296_02744806 DLX4B coding downstream 71270 2737872 ~ 2745013 (+)
CI01000047_02779424_02823789 ITGA3, ITGA3B coding downstream 112822 2779424 ~ 2823789 (+)
CI01000047_02881833_02887627 NA coding downstream 215231 2881833 ~ 2887744 (+)
CI01000047_02889253_02916373 NA coding downstream 222651 2889253 ~ 2916436 (+)
CI01000047_02945353_02965219 TBC1D12, TBC1D12B coding downstream 278751 2945353 ~ 2965377 (+)
G200136 NA non-coding upstream 40722 2617010 ~ 2617270 (+)
G200133 NA non-coding upstream 58995 2596436 ~ 2598997 (+)
G200132 NA non-coding upstream 62519 2595150 ~ 2595473 (+)
G200130 NA non-coding upstream 71117 2585450 ~ 2586875 (+)
G200090 NA non-coding upstream 77586 2579949 ~ 2580406 (+)
G201156 NA non-coding downstream 204652 2871254 ~ 2871454 (+)
G201160 NA non-coding downstream 209245 2875847 ~ 2876068 (+)
G201165 NA non-coding downstream 260882 2927484 ~ 2927769 (+)
G201168 NA non-coding downstream 265808 2932410 ~ 2932614 (+)
G201127 NA non-coding downstream 299246 2965848 ~ 2966609 (+)
G200076 NA other upstream 79995 2520596 ~ 2577997 (+)
G200003 NA other upstream 339030 2316863 ~ 2318962 (+)
CI01000047_01749606_01752688 NA other upstream 905155 1749606 ~ 1752688 (+)
G199386 NA other upstream 1692536 929871 ~ 965456 (+)
CI01000047_00773429_00831230 EXOC6 other upstream 1825382 773429 ~ 832610 (+)
G201186 NA other downstream 352103 3018705 ~ 3088187 (+)
G201387 NA other downstream 1029914 3696516 ~ 3701860 (+)
G201599 NA other downstream 1749211 4415813 ~ 4482457 (+)
G202382 NA other downstream 4149115 6815717 ~ 6816118 (+)

Expression


Co-expression Network