G201165


Basic Information

Item Value
gene id G201165
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 2927484 ~ 2927769 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU228241
ACTCATATATTTAACTCAGGTGCTGTCCATTTCTTCTGATCATCCTTGAGATGGTTCTACACCTTCATTTGAGTCCAGCTGTGTTTGATTATACTGATTGGACTTGATTAGGAAAGCCACACACCTGTCTATATAAGAGCTTACAGCTCACAGTGCATGTCAGAGCAAATGAGAATCATGAGGTCAAAGGAACGGCCTGAAGAGCTCAGAGACAGAATTGTGGCAAGGCACAGATCTGGCCAAGGTTACAAAAACATTTCTGCTGCACTTAAGGTTCCTAAGNNNN

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU228241 True 286 lncRNA 0.42 1 2927484 2927769

Neighbor

gene id symbol gene type direction distance location
CI01000047_02889253_02916373 NA coding upstream 11048 2889253 ~ 2916436 (+)
CI01000047_02881833_02887627 NA coding upstream 39740 2881833 ~ 2887744 (+)
CI01000047_02779424_02823789 ITGA3, ITGA3B coding upstream 103695 2779424 ~ 2823789 (+)
CI01000047_02738296_02744806 DLX4B coding upstream 182471 2737872 ~ 2745013 (+)
CI01000047_02602977_02614833 MYST2, KAT7B, KAT7 coding upstream 312402 2602977 ~ 2615082 (+)
CI01000047_02945353_02965219 TBC1D12, TBC1D12B coding downstream 17584 2945353 ~ 2965377 (+)
CI01000047_02968461_02978899 NOC3L coding downstream 40629 2968398 ~ 2978943 (+)
CI01000047_03097826_03105348 NA coding downstream 170057 3097826 ~ 3105505 (+)
CI01000047_03107522_03112233 NA coding downstream 179524 3107293 ~ 3112436 (+)
CI01000047_03132426_03133335 RBP2, RBP4, RBP coding downstream 204503 3132272 ~ 3133429 (+)
G201160 NA non-coding upstream 51416 2875847 ~ 2876068 (+)
G201156 NA non-coding upstream 56030 2871254 ~ 2871454 (+)
G200158 NA non-coding upstream 260882 2657992 ~ 2666602 (+)
G200136 NA non-coding upstream 310214 2617010 ~ 2617270 (+)
G200133 NA non-coding upstream 328487 2596436 ~ 2598997 (+)
G201168 NA non-coding downstream 4641 2932410 ~ 2932614 (+)
G201127 NA non-coding downstream 38079 2965848 ~ 2966609 (+)
G201191 NA non-coding downstream 153814 3081583 ~ 3082197 (+)
G201234 NA non-coding downstream 209218 3136987 ~ 3139574 (+)
G201236 NA non-coding downstream 216927 3144696 ~ 3150280 (+)
G200076 NA other upstream 349487 2520596 ~ 2577997 (+)
G200003 NA other upstream 608522 2316863 ~ 2318962 (+)
CI01000047_01749606_01752688 NA other upstream 1174647 1749606 ~ 1752688 (+)
G199386 NA other upstream 1962028 929871 ~ 965456 (+)
CI01000047_00773429_00831230 EXOC6 other upstream 2094874 773429 ~ 832610 (+)
G201186 NA other downstream 90936 3018705 ~ 3088187 (+)
G201387 NA other downstream 768747 3696516 ~ 3701860 (+)
G201599 NA other downstream 1488044 4415813 ~ 4482457 (+)
G202382 NA other downstream 3887948 6815717 ~ 6816118 (+)

Expression


Co-expression Network