G201127


Basic Information

Item Value
gene id G201127
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 2965848 ~ 2966609 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU228199
GATTTGAAATGACATGAGGGTGAGTAAATAATGACAAAATTTTCATTTTTGGGTGAACTATCCCTTTAATGCACTTGAGATTTTACCAGTAGAATAGAACAGAGGTTCTGAGATTTTATAAAATGTGATGTTTTTTAAACGGTTTTGTTATGTAGAGCAAGACCATACTGAAGTGCAATAGAAATTGTAAAAATAAGTCTGATGCAGTTAATAGTGCAGGAATAATGCATTTAGTGTGTGAGGTATTCAGAAGCATTTTGATGAAGAATTATTGCATTTTCGCTGTCGACACTCTATTGTTCTTCTTTTAAAACACTAATATGTAGCCTAATTTTAAAACTAAATCTTATGTGTGACAGTAGAGCCCACAAACTCTATATGTGAATAATGCATTCAGGCATTTGTGTACTTAATGTACATTTTCTAAAATGAACTGACATTTGCCAGTTAAAGAATAAGAATGTGTGGTATAATAATAAAATTTGAGTCATTTTTGTGTGATTTCGGGTTCAATTATTTGATGAAATGCATTGTTTATCATGGATTTTAACCCTAATATCTGTAAATATTGGGTCTCTAAACATTTTTTGATTCGGTGATGTATCTTGATGAAAAATGTAAATTGTATCATTAATTCTTGGTTTGTTTTCTACACACTCCTGGTTTTATTGTACAGTTTTCATACTTGTGTGAAGATAAATTGTAAATAGGTGAAATATTTGACACCACAAAATTCAAATGTGCAAATAAATTTAAAACTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU228199 True 762 lncRNA 0.30 1 2965848 2966609

Neighbor

gene id symbol gene type direction distance location
CI01000047_02945353_02965219 TBC1D12, TBC1D12B coding upstream 471 2945353 ~ 2965377 (+)
CI01000047_02889253_02916373 NA coding upstream 49412 2889253 ~ 2916436 (+)
CI01000047_02881833_02887627 NA coding upstream 78104 2881833 ~ 2887744 (+)
CI01000047_02779424_02823789 ITGA3, ITGA3B coding upstream 142059 2779424 ~ 2823789 (+)
CI01000047_02738296_02744806 DLX4B coding upstream 220835 2737872 ~ 2745013 (+)
CI01000047_02968461_02978899 NOC3L coding downstream 1789 2968398 ~ 2978943 (+)
CI01000047_03097826_03105348 NA coding downstream 131217 3097826 ~ 3105505 (+)
CI01000047_03107522_03112233 NA coding downstream 140684 3107293 ~ 3112436 (+)
CI01000047_03132426_03133335 RBP2, RBP4, RBP coding downstream 165663 3132272 ~ 3133429 (+)
CI01000047_03247894_03250323 NA coding downstream 280994 3247603 ~ 3250759 (+)
G201168 NA non-coding upstream 33234 2932410 ~ 2932614 (+)
G201165 NA non-coding upstream 38079 2927484 ~ 2927769 (+)
G201160 NA non-coding upstream 89780 2875847 ~ 2876068 (+)
G201156 NA non-coding upstream 94394 2871254 ~ 2871454 (+)
G200158 NA non-coding upstream 299246 2657992 ~ 2666602 (+)
G201191 NA non-coding downstream 114974 3081583 ~ 3082197 (+)
G201234 NA non-coding downstream 170378 3136987 ~ 3139574 (+)
G201236 NA non-coding downstream 178087 3144696 ~ 3150280 (+)
G201250 NA non-coding downstream 199233 3165842 ~ 3166655 (+)
G201243 NA non-coding downstream 200552 3167161 ~ 3170434 (+)
G200076 NA other upstream 387851 2520596 ~ 2577997 (+)
G200003 NA other upstream 646886 2316863 ~ 2318962 (+)
CI01000047_01749606_01752688 NA other upstream 1213011 1749606 ~ 1752688 (+)
G199386 NA other upstream 2000392 929871 ~ 965456 (+)
CI01000047_00773429_00831230 EXOC6 other upstream 2133238 773429 ~ 832610 (+)
G201186 NA other downstream 52096 3018705 ~ 3088187 (+)
G201387 NA other downstream 729907 3696516 ~ 3701860 (+)
G201599 NA other downstream 1449204 4415813 ~ 4482457 (+)
G202382 NA other downstream 3849108 6815717 ~ 6816118 (+)

Expression


Co-expression Network