G202740


Basic Information

Item Value
gene id G202740
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 2965854 ~ 2966599 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU230063
ATTTATTTGCACATTTGAATTTTGTGGTGTCAAATATTTCACCTATTTACAATTTATCTTCACACAAGTATGAAAACTGTACAATAAAACCAGGAGTGTGTAGAAAACAAACCAAGAATTAATGATACAATTTACATTTTTCATCAAGATACATCACCGAATCAAAAAATGTTTAGAGACCCAATATTTACAGATATTAGGGTTAAAATCCATGATAAACAATGCATTTCATCAAATAATTGAACCCGAAATCACACAAAAATGACTCAAATTTTATTATTATACCACACATTCTTATTCTTTAACTGGCAAATGTCAGTTCATTTTAGAAAATGTACATTAAGTACACAAATGCCTGAATGCATTATTCACATATAGAGTTTGTGGGCTCTACTGTCACACATAAGATTTAGTTTTAAAATTAGGCTACATATTAGTGTTTTAAAAGAAGAACAATAGAGTGTCGACAGCGAAAATGCAATAATTCTTCATCAAAATGCTTCTGAATACCTCACACACTAAATGCATTATTCCTGCACTATTAACTGCATCAGACTTATTTTTACAATTTCTATTGCACTTCAGTATGGTCTTGCTCTACATAACAAAACCGTTTAAAAAACATCACATTTTATAAAATCTCAGAACCTCTGTTCTATTCTACTGGTAAAATCTCAAGTGCATTAAAGGGATAGTTCACCCAAAAATGAAAATTTTGTCATTATTTACTCACCCTCATGTCATTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU230063 True 746 lncRNA 0.30 1 2965854 2966599

Neighbor

gene id symbol gene type direction distance location
CI01000047_02939538_02940848 DRD6B coding downstream 23436 2939493 ~ 2942418 (-)
CI01000047_02829408_02858055 ACE coding downstream 107292 2828456 ~ 2858562 (-)
CI01000047_02826142_02826444 NA coding downstream 139410 2825743 ~ 2826444 (-)
CI01000047_02747442_02755248 DLX3B coding downstream 210606 2746901 ~ 2755248 (-)
CI01000047_02615438_02617123 NA coding downstream 348582 2615270 ~ 2617272 (-)
CI01000047_03002349_03064708 PLCE1 coding upstream 35750 3002349 ~ 3065687 (-)
CI01000047_03080182_03082134 SLC35G1 coding upstream 113487 3080086 ~ 3082134 (-)
CI01000047_03085017_03085558 NA coding upstream 118396 3084995 ~ 3085691 (-)
CI01000047_03087382_03094014 LGI1B coding upstream 120481 3087080 ~ 3096017 (-)
CI01000047_03115498_03127047 PDE6C coding upstream 148588 3115187 ~ 3128105 (-)
G202774 NA non-coding downstream 66037 2896064 ~ 2899817 (-)
G202767 NA non-coding downstream 77059 2888578 ~ 2888795 (-)
G202766 NA non-coding downstream 79336 2886206 ~ 2886518 (-)
G202732 NA non-coding downstream 84322 2881323 ~ 2881532 (-)
G202731 NA non-coding downstream 86167 2879297 ~ 2879687 (-)
G202747 NA non-coding upstream 378 2966977 ~ 2972961 (-)
G202755 NA non-coding upstream 111394 3077993 ~ 3088700 (-)
G202792 NA non-coding upstream 131242 3097841 ~ 3100120 (-)
G202757 NA non-coding upstream 146683 3113282 ~ 3113978 (-)
G202733 NA non-coding upstream 165714 3132313 ~ 3133652 (-)
CI01000047_01708628_01744282 BICC1B, BICC1 other downstream 1250337 1706068 ~ 1744282 (-)
G200472 NA other downstream 2131383 833941 ~ 834471 (-)
CI01000047_00519408_00522108 PYYB other downstream 2443612 519108 ~ 522245 (-)
G200299 NA other downstream 2697819 267530 ~ 268035 (-)
G202944 NA other upstream 831204 3985342 ~ 3986402 (-)
CI01000047_04213574_04213976 NA other upstream 1246810 4213409 ~ 4214085 (-)
CI01000047_04285605_04286644 COA3A other upstream 1312309 4285227 ~ 4286694 (-)
CI01000047_04575184_04576337 GNGT2B, GNGT2 other upstream 1607736 4574335 ~ 4576342 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
tiger barb (Puntius tetrazona) G84581 NA non-coding NC_056710.1 CM032079.1 745363 ~ 746015 (+)