G202844


Basic Information

Item Value
gene id G202844
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 3332850 ~ 3432629 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU230191
ATATTTATTAAAATATCTCAGATTGTGTTCATCAGAAAGTCATATACACTTAGGATGGCTTGAGGGTGAGTAAAGCTTGGGCTAATTTTCATATGAAAGTGAACTAATCCTTTAAGGTTAAACCACTGTAGTCATGTTGGCTATGTTAACGATGTCTTTACTACTTTTCTGGACCTTAAATGTGATAATTATGTTGCTTTCAAATATGGGGGATAGAAAAAAAACTCTCGGATTTCATCAAAAATATCTTAATTTGTGTTCCGAAGATGAACGAAGGTCTTACAGGTTTGGAACGACATGAGGATGAGTAATTAATGACAGAAATTTAATTTTGGGGTGAACTAACCCTTTAATAAATTGGATTTGTAACATTCTTTGGCATTCCTGGATTTTTCACTGATCCACATACCTATGCTTTCTGGAATTTCCTTTGGAAGAAGGCTGTTAGTTGTCCCAAATGACGTGCTGTGCACTGTGTACTTTAGTGTCTAGTGTATGATTATTACGCTACATAGCCCCTTTGCTACATAAGGACAGCTGCGATGGTTGAGCGCATGAAGTGTCCAACATTCCACATGTTATTTTTTCGGTTAATTAAGCATCTGGCTATTTGAAGTGCACTATTTCTTTTTGGAAAATTCAGTCTGAACACACTAGTAGTCACATTATTTATACTACAAAATGGCATAGAACAGCGTGTAAGTAAGTGAATTGTGACGCACCTTTTGAATTAGTCTCGTCAAACCATTGCGACTGCATTGCTATCATGAATCAGGCACGTTACATGTGGGCTGTTCACAGGAGTCCCAAGGGAGCGTGGGGGCATGTTTGTGACTGTAGGCCTGTGTGTTCATGCCCTGAACCTTGTAGAGAGTCACTGTTAATTTCCACTCCGACCTTGTTTGTACAGTGAGATCATAGATCTTGTTGTCATAAGTCTAGTCATTTCGGCTGTCCTCCTCTGCTGTGGACCTAACTTGAAAACTTAAGCAAGGTTAAATTTCCTGCTTGGCCCCTGAGGGAGCGTCTGATTCATTGTAGGTGAAAATAGAGAAGGTGAAACGGAGAACCCTGATGTTTTGGTTAATATTAAAATCAAAGTAAACCACAGGTGATGAATAAAAAAACTGTTTTTCTTGCTGTTTCACTTTCATGTGTAATTTTTGTTCCTACTTCCTGTTTTCTTATGCGTGTACAGAGCACAGAATAACAGTTACGGCATTGTGAGCTCTGCCTAACAGAAGCACACACGTTTAATACACGTTTCAGACCAGTTGTGCTGTAAACTGGGCAGTATATATTCAGATATTCTGGTGCTCAAATCCTGTTGCTTTGCAGATCAGCCCAATGAGCATTTAGATTCATCTTGATCATATTTGATCTGATTTAATATTTAGGGAGATAACATAGGATGCGGATAGAAAGCGATGTTGTTGATTTATTAATGGAAGCTGTTTTAAAAGGAGCCGTTTAGCAGCTTGCTGAGTTGGCTTTGCACCTTTGACCTAAATAATCAGGCATCCGTGAATGCAGATTTTGGATGTCAGATTTGAGCTCACTGAAACATGCCCCACTTTCACTTAACAGCACTATCACATATGCCTGAATCTGTTCCTGGTGTGTGTGTTTTAATGGTTGTCGATTTTCAGTCCCGTTTCATCATTTTCAAGCAACGTTCTCCGGCTAATCTTTCTGGGCACATGCTTTATGACATCACACTGTGACGGTTGAGAAATTAGAGCATGAGGAGCTGCTGCTTGTTGACCTCTGACTGCAGTTAAATCAAGATGAATTTAAACTTTGTGCATCCAAGGACATTGATCCCAAACACCCACACTTATTACTGGAAGCTTTTAATGGATCACAGCTGTTATGCAAATGGAAGATTTACTTTTACTGAAATGAAAGACCACTTTAATCCATTGAGAACTGGGTTGACTGCTGTTTAGTGCTCTACAGAGGTGGATTTTTAATGTTCCGTTTACTGAAAAAATTGCTAAAAGATTGAAAACAAAAGTTGTCTATTTTTCTTTGACGAGCATGTTTATAGATTGTGGAATGTTTATTGGCCAATGATGATGATGATAACAGTGTGGGTGAATCTCTCAAAGACATGCCCAGCTCGTGTTTCACTTCAAAATCAAAAAGAAAGAAATAACATTTTTGGCATATTTTGTATAAAGTTTGGGGTCATTATGATTTAAAGTGATAGTTCACCCAAAAATAAAAAATCTGTCATCATTCATGTTCACACTTGGCAGGTTGGGTTCGATTAAAATGAACTCTGGTAGGATTGCTCTGTTAGTTATTTGAGTAAGTGTGAATGCTACCATCCGAACCCTGGTGCGCAACAAACAAGCGGACCGAGTCCCCTGAAAAGATGGGTCTCATTTCGTTTTCAAAGGAGGTCTGATGCGGTTCGATTGAAATATGAATGCAACACGGACAAAAGACTGCTCAAGCGTATGTGTTTTTTTTTTTCTCGTCATAGTCGTGGTTTTGCCCATCACAGTTTGGTACTACGGATGTGCATTTTTCAAAAATATTGTATTTGAAATATTTGGGCTCATCAAAAAAAACCTGAATATTCGATTATTTGTTTATTTAAATGACGTTTAACATGAAAGAGGTTATTTTTAAATCCTCATTCTGAACAAGCTTACAATTAGGCAATATACACAACATGCTTATGTTATTTACATTGAGTGTTTGTTTTTGTTTTTTTAGCAGAAAACATTAAACAATATGTGTAAACAAAAATATAAAGAACAAAAGCATTAAAAGGGTTAGTTCACCCAAAAATGAAATTTCTGTCATTAAGTACTCGCCCTCATGTCGCCCCAAACCAGTAAGACCTTTGTTTTGTCTTCACAAATTAAGATATTTTTGATGAAATCCGAGGTCCACACATAGGCAGCAATGACATTGCACCTTTTGAGGTCCAGAAAGGTACTAAAGACATCGTTAAAACTGGCAACGTGACTGCAGTGGTTCAACCTTAATATTATGAAGCGACAAGAATACTTTTTGTGTGCAATAACAAAACAAAAATAACGACTTTATTCAACAAATTCGTCTGTCCCCTGTTATACTGCTACGCTATTTTCGTTGCAGAGCTTCAGTGTTGTTTATGTCTGAACGCTAATACTGAGCCCTCGGATTTCATGAAAAATATCTTAATTTGTGTTCTGAAGACAAATGAAGGTCTTACGGGTGTGGAACGACATGAGGGTGAGTAATTAATGACAGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU230191 True 3250 lncRNA 0.38 2 3332850 3432629

Neighbor

gene id symbol gene type direction distance location
CI01000047_03321589_03328761 GHRHR2 coding downstream 4089 3319692 ~ 3328761 (-)
CI01000047_03271413_03302291 SCN4AA coding downstream 30479 3269915 ~ 3302371 (-)
CI01000047_03258353_03261127 NA coding downstream 71025 3258353 ~ 3261825 (-)
CI01000047_03223945_03241971 NA coding downstream 90134 3223623 ~ 3242716 (-)
CI01000047_03177108_03216092 ARHGAP27 coding downstream 116718 3177083 ~ 3216132 (-)
CI01000047_03514753_03523245 NA coding upstream 81822 3514451 ~ 3523245 (-)
CI01000047_03689400_03699969 NA coding upstream 256771 3689400 ~ 3699969 (-)
CI01000047_03713156_03716003 NA coding upstream 280527 3713156 ~ 3716003 (-)
CI01000047_03741720_03750331 MAPK7 coding upstream 308441 3741070 ~ 3750375 (-)
CI01000047_03785018_03800982 NA coding upstream 352113 3784742 ~ 3801004 (-)
G202733 NA non-coding downstream 199198 3132313 ~ 3133652 (-)
G202757 NA non-coding downstream 218872 3113282 ~ 3113978 (-)
G202792 NA non-coding downstream 232730 3097841 ~ 3100120 (-)
G202755 NA non-coding downstream 244150 3077993 ~ 3088700 (-)
G202747 NA non-coding downstream 359889 2966977 ~ 2972961 (-)
G202869 NA non-coding upstream 8198 3440827 ~ 3445116 (-)
G202870 NA non-coding upstream 12586 3445215 ~ 3445658 (-)
G202877 NA non-coding upstream 21901 3454530 ~ 3458840 (-)
G202880 NA non-coding upstream 38858 3471487 ~ 3471707 (-)
G202840 NA non-coding upstream 74292 3506921 ~ 3509108 (-)
CI01000047_01708628_01744282 BICC1B, BICC1 other downstream 1617333 1706068 ~ 1744282 (-)
G200472 NA other downstream 2498379 833941 ~ 834471 (-)
CI01000047_00519408_00522108 PYYB other downstream 2810608 519108 ~ 522245 (-)
G200299 NA other downstream 3064815 267530 ~ 268035 (-)
G202944 NA other upstream 365174 3985342 ~ 3986402 (-)
CI01000047_04213574_04213976 NA other upstream 780780 4213409 ~ 4214085 (-)
CI01000047_04285605_04286644 COA3A other upstream 846279 4285227 ~ 4286694 (-)
CI01000047_04575184_04576337 GNGT2B, GNGT2 other upstream 1141706 4574335 ~ 4576342 (-)
G203286 NA other upstream 1441750 4874379 ~ 4876734 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
striped catfish (Pangasianodon hypophthalmus) G191591 NA non-coding NC_047606.1 CM018552.1 5946225 ~ 5948586 (+)