XLOC_009478 (CR854897.2)


Basic Information

Item Value
gene id XLOC_009478
gene name CR854897.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 41393401 ~ 41396073 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00018622
CCTGTTTCATAATGGACGACACACAAATATCCAGAGATGAAAATGTTTCTCCAGGATGCAGaagagatcagatccagagcccagctgtgtgtctatgaggaGTGACTCTATGGATCAACCAATGCACTTTAAGAGTGAAGACACACCACCTGATCTCAGttcagttcatcagaaaagctcagagcccagctgtgtgtctatgaggaGTGATGATGAATCTGTGCATCAGCCATTACATGTTAAGAGTGGAGACACAGAGACTGATCTCAGcCATAAAGCCCTCAACACATTTAGATCAGATCTGCTGAAGAAGTTTGAGTGTCTGTATGAGGGAACAGCGGCGCAGGGAAACCCAACACTCCTGAATGAGATCTACACAGAGCTCTACATCACAGAGAGTGAGAGTGGAGAGATCAGTCATGAGCATGAGGTGAGACAGATTGAGACACAATCCAGGAGATCAACAACAGAGGACACAGCGATCAAATGCAGAGACATCTTTACACCTTTACCTGGACAAGACAAAGCCATCAGAACTGTGCTGACGAAGGGAGTCGCTGGCATCGGAAAAacagtctctgtgcagaagtttaTCCTGGACTGGGCTGAAGAGAAGCAGAATCAGGACGTCCAGCTCATATTTCCACTTCCTTTCAGAGAGATCAATCTGATGAAGGACAAAACACTCAGTCTGTCAGATCTTCTTCTGCTCTTTTTCCCTCAAACTAAAGAAATGGAAATATCCAGTGACAAATATAAAGTgctgttcatctttgatggtctggacgAGTGTCGTCTGTCTCTGGATTTTAAAAGGAATAAGACTCTGAGAGATGTGACCAAAACATCATCAGTGGACGTGCTGCTGACAAACCTGATTGTGGGgaatctgcttccctctgctctcatctggatcacctccagaccagcagcagcagatctcGTCCCCTCTGAGTGTGTCCATCGAGTGACAGAGGTACGAGGCTTCAATGACCCACAGAAGGAGGAATACTTCAGCAAGAGAATCAGTGATCAGAGTCTGGCCAATACAATCATCTCACACCTGAAGTCCTCCAGGAGCCTctacatcatgtgccacatcccagtgttCTGCTGGATCTCAGCCACTGTTCTGGAGAAGATGTTGAGTGAAGCAGAGACTGCAGAGATTCCCAAGACTCTCactcagatgtacacacacttcctGATCCTGCAGACCAACATCAAACGTCAGAAGGACTATGAGGAGAAGCTGACAGATGAAGACATGATCCTCAAACTGGGGAAAGTGGCTTTTCAGCAGCTCATGAAAGGCAATATAATCTTCTATGAGGAAGACCTGAGAGAGTGTGGCATTGATGTGGCAGAAGCTTCAGTTTACTCAGGATTGTGCACTCAGATATTCAGAGAGGAGTTTGGCTTGTATCAGGGGAAAGTCTTCAGCTTTGTTCATCTGAGCATTCAGGAACATCTAGCGGCTCTATATGTGCACCTCTCCTGTATAAACAACAACAGAGATGAGTTTGAGCAAATCAACAAACAGAGTTTGTGGTCTAAGGTTAGACTTAACCTTGCAAAGTTAAAGTTACACTTGTTTCAACTCACTATATCAAATCATGTTTCAATATCCAAACTGCATCAGCGAGCTGTAAATGAGGCTCTACAGAGTAAAAATGCACATCTGGATCTTTTCCTGCAGTTTCTTCTGGGTCTGTCAGTGGAGTCTCATCAGATTCTCCTACAAGGACTACTGAAGATGAAAATCAGATCAATCCAGAATAATAAAACAGTCGAGTACATCAAGAAGAAGATCAGCACCATCGACTCTCCAGAGAAATTCATCAATCTGTttcactgtctgaatgaactgggTGATCATTCACTAGTGGAGGAAATACAGCAGTATCTGAAATCTGGAACAATAAAGGGAGCCAAACTCTCTTCATCTCAGTGGTCAGCTGTAGTTTTTGTGTTGTTGACGTCAGAGAAGAAGCTGGAGGAGTTTGATATTCATGTTTAACTAGCTTtgttttcatcatcctgtttgcTCATAGAACCTCTGTTTTAATGCACATATTTGAGT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000095780

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00018622 True 2083 unprocessed_pseudogene 0.44 4 41393401 41396073

Neighbor

gene id symbol gene type direction distance location
XLOC_009477 si:dkey-121n8.7 coding downstream 2991 41349268 ~ 41390410 (-)
XLOC_009475 usp16 coding downstream 82106 41249772 ~ 41311295 (-)
XLOC_009474 NA coding downstream 147392 41238245 ~ 41246009 (-)
XLOC_009473 slc36a4 coding downstream 158374 41169211 ~ 41235027 (-)
XLOC_009472 NA coding downstream 321204 41068774 ~ 41072197 (-)
XLOC_009479 CR854897.1 coding upstream 4447 41400520 ~ 41408148 (-)
XLOC_009480 nlrc8 coding upstream 26175 41422248 ~ 41438821 (-)
XLOC_009481 si:ch211-187g4.1 coding upstream 75102 41471175 ~ 41486793 (-)
XLOC_009482 CR925731.1 coding upstream 133187 41529260 ~ 41543440 (-)
XLOC_009483 NA coding upstream 244368 41640441 ~ 41667355 (-)
XLOC_009471 BX571794.3 non-coding downstream 1032648 40356379 ~ 40360753 (-)
XLOC_009468 CR388129.1 non-coding downstream 1263860 40125409 ~ 40129541 (-)
XLOC_009467 CR759918.2 non-coding downstream 1324274 40069011 ~ 40069127 (-)
XLOC_009494 NA non-coding upstream 657766 42053839 ~ 42058846 (-)
XLOC_009495 CR925728.2 non-coding upstream 668110 42064183 ~ 42066345 (-)
XLOC_009496 CR925728.1 non-coding upstream 684321 42080394 ~ 42086212 (-)

Expression


Co-expression Network