G202959


Basic Information

Item Value
gene id G202959
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 4044710 ~ 4052438 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU230354
CTTTAATAGCACTCACTTTTATAGTATAGAATCCTTAACAAGCCCCACCATTGGCATACCTTAGCAAGTCATATTAAACATAAAAAATTGACATAAATCAATTAATCTATATGTATGATATGCATTTACATTTCTTTTTAAAATCAGAAACATCAATGTTTCTTTCTTGATGATGGACAGTCAGTAAGATTTTTTAAAAGAAATTATTACTTTTAAATTGATCAAAATGACAGTAAATACATTTTTAATGTTACAAAAGTGTTTAATGTTTCAAATAAACACTGTTCTTTTGAACTTTCTATTCATAAAAGAATCCTGAGGAAAAAATATCAGTTTCCTCAAAAATATGAAGCAGTGCAGCTATTTTCAACATTGATAATAAGAAGAAATGTTTCTTGAGCAGCAAATTAGCATATTAGAATGATTTCTGAAGGATCATGTGACACTGAAGACTGGAGTAATGGAATAAATTACATTTAAAAAGTGTTCAAATAAAGAACAATTGTTATAAATTGTAATATTAATTATATAGTGTATTTGGTCAAATAAATGCATTGGTGAAACATGGAAAAAATTATAAAGTTTTAAAAATCTATTATTTTTGCATGTGTCCTTTTACCGATATGAGTATTTCTCCAGACTCTCTCAGCAGGCTTCAGGAGGGAGCAGTGCGCCACTCTGCACACGATCGCACCTCCCCTCACTGTGTCATCCAGCTCTTTAAGTAATGCTTTTGCTCGAAATGTCCTCGGCAGAGTTTGCAAAGGACCCCAAAGCTCAGCTCCTGCTTTGATTTCCCCTTCGCTGTCCTCTCCCTCCTCAATCTCATTCTCTTTTACATGCAGCCATTTAACAGAGATTTCAGGGGGGTAGAAACCAGTTATGTCACAGGCGAGGGTCAAAGGTCCCTTCTCAGCAGATGGAAAGGAAGAGATGATTTCTGAAACGGTGGGCTGTTTTATGAATCCTAAGAAAGAAAAAAGTCAGTTATTTGATCAAAAATTTGTTTTCGTTGTTAATGTACTTCCAGACTATGTTTGGAATGGACTGCTATGATACTGCTTACTGTATATTATCACTTTACGTGAATGTATTGTATGTATGCAAATAAAGTTGGATATAATATATATCCAACTTAATATAAAGAGCTGGGCGGAAATATAATTACATTTTGCGATGATATAAACAATCACGCAGCTGAGATTTGCTTTAAAGTATGTATTGCTTTACGCTAATACTGTATGCATGCAAGTAGAGTATGTACTTTACACTTTATGTAACAAAAACCAACAGTATTATGGATATTTTGCATGTTTGATCATGTTGCAAGTTGTTCGGTGTTTAAATATCTCAGCTCTTGGCATTCCGATAAAATAATGAACAAAAAAGCATTTAAAAGTTTTGAATGATATCCATTAAGTTTCATTTCTCACACTGGACATAGTAGGCAAACTTGAGCACAATACACTGTTGGATTAAATATTCCATTCAGTGTGCTCTGGTTTTGGTCAATGAAGTAGTTAATCCACCTATTCTAAAAAAATTCACATACTGTGCAAAGTATATACTGCAGAAATAGTATGTGTAACATGGAAGTTTCCTATAGAGCGCAACAGGAAGTAAAAATCCCATTCATTTTCTCCTGATTTTTAATGATAACTTACAGACCTTTAAAGATAGACCTGACCAAGACAGACAGAGGTTGGTATATGCTTTTTTGAAGCTGTCAATTTGCATTATTTCAAATGATTTTTTTTCAAAGAAGTCTTTAACAGCAGAATTCCTGGTAAAAAACTACATTACCCATGATGCTGTAAGTAAAGAAAATTCCACCAATCAGAGAGTTGTATCCTTTCAAAATACTTAAATTTTATTTATACCATGGTCTGTCTGAATACTTGATTCTGATTGGTTGGAAGGTGTGCATTAAAACTATTTAATGCACAGGTAGTTCCAGTCAGTTTAATCACCATTCTATATTAATGTGCAGTTTTCTCATCAGACAGAGATCGGGGCAGAGCTGCAAATTTAGTGATTTTGTCACAAGATTTAGTGACTTCCTGCCCCTTTTGAGACTTTTTTCAAAAGCCTAGCGACAAATCTAGCAATTTCTTGGATAAACCTTATCGAGATCAGTGGACTCGCCAGTATGACGTCATACTACATTTAGCGACCTGTTTTAGCTACTTTCAACTGAAAGCAATTGGCAACACTGGATATATATATATATATATATATATATATATATATAAAAATTGACAACTTTAAATGAATAATGTTCAATTTCTCCTTATTTTTTATGGGACTGTAGTTCTTTCCTTCACTAAAGCAGTTAAGTTCACAGTCTTGTCCTTCTATGTGTTTTTCAAATATGTTTTTGCTCCACATCAACTTTTGTAAAGTTGTGATTCTCCTCATAGCTGGTTGGTTTGGTTCATTGCTTATGACTCTTAAATGAAGACTTTTTAAAGATCCCTATAGGAAAAATGAATGGGAAAAATACTGGCAGCTGAAAAAGTGTGCGGGCACTGTTGCACTCGATACTGAACACAGCCTTAATCTTATTTACAAGAATTCAGTTATTTTATTCCAGCGTTCACCTCTAGTTTCCCGTGTGATGGGTTGCTTTAAGGCCATGTGGTGAACGGTGACCCACACCCTGGTTTCTCCTTTCTCCAGCTCTAACAGGGGCAGCCTGCACTGGCTCATGGCTGAAAAGAAGCCTTCAGCATCAGGCCGAGGAGCTGCCAGCGCTGGCGGGACGGACACAGGGCTCAGCTCCCCACCCTCACAGAACCAGCGGAAGGTGATGATGTCCGGATGAAAGCGAGAGGCTTGGGCTACCATTGTCACAACACCTCCTTCCTCATTTGGCTCTGAGAACTGGATCTCTGAAACTTCAGGTGGTGCTAGAATAGTAAACTTGTCAGACACTCTCTCAGCCACAATCTTGTCTTTCCCCTTATATGAGATGTGGCATTTGAAGACTGCACCCTTGTGAATGGATAGGTTGGGTATAAATGTGATGGAGGAGAACAGTTTGTTTGAGCCAGAGGACGAGCGTGGTGACATCTGAGTGTGTAGCTTGTAATATCCTGAGGCAGTAGAGGGCAGCAGAGGACCTTTCTCTGACACCACAGACACACGAGAAGTGTAGGATGCAGAGTAAAAAGGACCAGATTTTTTCTCTTTGTATGAAGTGTCTGTGATGGGCACATCATTCAGAAACCATGTTGTTTGTACCCTCTCTGCCAACCTGCCTTCCACACTGATAGTGACTCTGCCTTTCTTACCCACAATCACCCTCGGTGGCAGAACAATCGCTGAGACATTCAGAGACTTCAGCTTCTCATCCCTTCTCTTCCAAGAAAATCCAAAGCAGAGCAAAAAAACAAGGGTGATTGAAATTATCATCATCGCTACTGAAGCCTTGGCTGACTTATTCAGACCTGGGTTTTGCCCACGTGGGTCAGCAATGGAAAGGTTAATGGTTCCATAAGCAGGTTCTTGCACATTGTATTGCTGGGCCACACATTTCACCTCTCCTCCTCTGCTCCTCTCCTCCACACTCAAAGTGTGATATTGATGTCTCCTATACATTCCATCCTCATTCTGGATGGATAAGGGAAGCTCAGGAAGAACCTTTCCATTCTGGATCCATAGAATGGATACGTTGTTAGGGTAGAACCCACTGATGTCACAGGAGAGGGTGAGTGGAGATGAGTGTGAAGATGAGGGAACAGCGGAGAGAGTCACCAT

Function

NR:

description
uncharacterized protein LOC103021963 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU230354 True 3759 lncRNA 0.38 6 4044710 4052438

Neighbor

gene id symbol gene type direction distance location
CI01000047_04022011_04032483 NA coding downstream 12044 4020885 ~ 4032666 (-)
CI01000047_03947036_03979744 NA coding downstream 64385 3946306 ~ 3980325 (-)
CI01000047_03873674_03934985 NA coding downstream 109581 3873459 ~ 3935129 (-)
CI01000047_03855710_03868781 NA coding downstream 174906 3855543 ~ 3869804 (-)
CI01000047_03785018_03800982 NA coding downstream 243706 3784742 ~ 3801004 (-)
CI01000047_04105620_04111019 NA coding upstream 52985 4105423 ~ 4111184 (-)
CI01000047_04128025_04134725 NIF3L1 coding upstream 75464 4127902 ~ 4134725 (-)
CI01000047_04137872_04142531 CABP5B, CABP5, CABP5A coding upstream 85161 4137599 ~ 4142531 (-)
CI01000047_04213574_04213976 NA coding upstream 160983 4213409 ~ 4214085 (-)
CI01000047_04285605_04286644 COA3A coding upstream 232789 4285227 ~ 4286694 (-)
G203059 NA non-coding downstream 89436 3949616 ~ 3955274 (-)
G203046 NA non-coding downstream 133925 3880878 ~ 3910785 (-)
G203051 NA non-coding downstream 138486 3905622 ~ 3906224 (-)
G202934 NA non-coding upstream 23481 4075919 ~ 4086107 (-)
G203082 NA non-coding upstream 39271 4091709 ~ 4091935 (-)
G203084 NA non-coding upstream 40740 4093178 ~ 4093411 (-)
G203085 NA non-coding upstream 40981 4093419 ~ 4093621 (-)
G202997 NA non-coding upstream 41917 4094355 ~ 4094892 (-)
G202944 NA other downstream 58308 3985342 ~ 3986402 (-)
G202733 NA other downstream 911058 3132313 ~ 3133652 (-)
CI01000047_01708628_01744282 BICC1B, BICC1 other downstream 2329193 1706068 ~ 1744282 (-)
G200472 NA other downstream 3210239 833941 ~ 834471 (-)
CI01000047_00519408_00522108 PYYB other downstream 3522468 519108 ~ 522245 (-)
CI01000047_04575184_04576337 GNGT2B, GNGT2 other upstream 521897 4574335 ~ 4576342 (-)
G203286 NA other upstream 821941 4874379 ~ 4876734 (-)
G203840 NA other upstream 1866070 5918508 ~ 5927344 (-)

Expression


Co-expression Network