G202997


Basic Information

Item Value
gene id G202997
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 4094355 ~ 4094892 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU230392
CTGCTGTGCGCTTAATAAACAGAATGTTGTGTGTTGGTGTGGACGTTAAAATTGTTATTCTTGATGTTAATGGGCTTTTATTGTATAATTCTGACATAAAAAGTAGAAATCATGACAGTCGAAAATGTTACTAAATCATAATTATGACATCCTAAGTCAATTAAGACAAAAATCATTGCTTTAAGACATGTCATAATTACGATACGACAACGCATGACCTTCTACTCAGAGCTGTTCACAGACTTGGACTGAGAATTATGCATTTCTATGGCAACACTAAATTAATCTGCAGAAGTCACATGGTACAAGTAAAATTCCCAGGTTACAAGTTGTAATTACAAGTTCGACGAAGACATGAACTCTTTTTACAAACCCGATTCCAAAAAAGTTGGGACACTACAAATTGTGAATAAAAAAGGAATGCAATGATGTGGAAGTTTCAAATTTCAATATTTTATTCAGAATACAACATAGATGACATATCAAATGTTTAAACTGAGAAAATGTATCATTTTAAGGGAAAAATAAGTTGATTTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU230392 True 538 lncRNA 0.32 1 4094355 4094892

Neighbor

gene id symbol gene type direction distance location
CI01000047_04022011_04032483 NA coding downstream 61689 4020885 ~ 4032666 (-)
CI01000047_03947036_03979744 NA coding downstream 114030 3946306 ~ 3980325 (-)
CI01000047_03873674_03934985 NA coding downstream 159226 3873459 ~ 3935129 (-)
CI01000047_03855710_03868781 NA coding downstream 224551 3855543 ~ 3869804 (-)
CI01000047_03785018_03800982 NA coding downstream 293351 3784742 ~ 3801004 (-)
CI01000047_04105620_04111019 NA coding upstream 10531 4105423 ~ 4111184 (-)
CI01000047_04128025_04134725 NIF3L1 coding upstream 33010 4127902 ~ 4134725 (-)
CI01000047_04137872_04142531 CABP5B, CABP5, CABP5A coding upstream 42707 4137599 ~ 4142531 (-)
CI01000047_04213574_04213976 NA coding upstream 118529 4213409 ~ 4214085 (-)
CI01000047_04285605_04286644 COA3A coding upstream 190335 4285227 ~ 4286694 (-)
G203085 NA non-coding downstream 734 4093419 ~ 4093621 (-)
G203084 NA non-coding downstream 944 4093178 ~ 4093411 (-)
G203082 NA non-coding downstream 2420 4091709 ~ 4091935 (-)
G202934 NA non-coding downstream 8248 4075919 ~ 4086107 (-)
G202959 NA non-coding downstream 41917 4044710 ~ 4052438 (-)
G202991 NA non-coding upstream 35820 4130712 ~ 4176770 (-)
G203143 NA non-coding upstream 124505 4219397 ~ 4219733 (-)
G203189 NA non-coding upstream 313581 4408473 ~ 4408827 (-)
G203191 NA non-coding upstream 325267 4420159 ~ 4425359 (-)
G203204 NA non-coding upstream 407313 4502205 ~ 4502522 (-)
G202944 NA other downstream 107953 3985342 ~ 3986402 (-)
G202733 NA other downstream 960703 3132313 ~ 3133652 (-)
CI01000047_01708628_01744282 BICC1B, BICC1 other downstream 2378838 1706068 ~ 1744282 (-)
G200472 NA other downstream 3259884 833941 ~ 834471 (-)
CI01000047_00519408_00522108 PYYB other downstream 3572113 519108 ~ 522245 (-)
CI01000047_04575184_04576337 GNGT2B, GNGT2 other upstream 479443 4574335 ~ 4576342 (-)
G203286 NA other upstream 779487 4874379 ~ 4876734 (-)
G203840 NA other upstream 1823616 5918508 ~ 5927344 (-)

Expression


Co-expression Network